Simple sequence repeat (SSR)
>UN56398
AACAGGAACCCCAAGCACACGCTTGTCGTGTTGCGTGCAGAGTCCTCTAAATCTTCCACAACAACTACCAAAACTGACGAATCATGTGATGCTT
CAACGGGGAAGAGTTCCGTTCGACGCACAACGTTCCCGAAAGAAGTGGAGGCACTGGTTCACGAGATGTGTGATGAGACTGAGGTTGCTGTGCT
CAAACTTAAGGTTGGAGATTTCGAGATGAACTTGAAGCGGAAGATTGGACAGACCGCAACTCCCACTCCCCATGCCTGATATTTCTCCATCAGT
AGCTCCCTCCGATTCCTTCTGAGCCCATGAACAAATCAGTTTCTGCTGCTGCTGCTGCTGCTGCTAGCCCCATCCAAAGCAAAACCCGCCTCTG
AAAAAGTGTCTCCATTTATTAATGCTGCATACCGAAAATCATCAAAGTTGGCTGCTTTGGATGCATCTGGATCTAACAACTATGTCCTAGTCAC
CTCTCCCTCAGTATGAGAAACCCCACCTCCTGCAATTCATATAAATTTTATCTGCATTT |
Primers for UN56398 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGATTGGACAGACCGCAAC |
60.119 |
20 |
ACTTTTTCAGAGGCGGGTTT |
60.11 |
20 |
155 |
229 |
383 |
| 2 |
GAAAGAAGTGGAGGCACTGG |
59.844 |
20 |
ACTTTTTCAGAGGCGGGTTT |
60.11 |
20 |
252 |
132 |
383 |
| 3 |
AAGTGGAGGCACTGGTTCAC |
60.159 |
20 |
ACTTTTTCAGAGGCGGGTTT |
60.11 |
20 |
247 |
137 |
383 |
|
|
