Simple sequence repeat (SSR)
>UN56457
GGGACCCAAAAAAAAAGAAGAAGAGTCGCAGCCAAGAAGAGCGGAACGAGGGATCAAATCGGAAAGTAGAACCGGAGTCGGAAATGGAAAAGAA
GAGTAACGGGGAGTCGGATGTCAACGGTAAATTGGACGCGTGTATCGATCTAAGCGCTCGACGCGTGGTCTACTCCTCCCTCGGCGGCGCGTTC
GCCGGTCTTCTCTTCTTCAGGAGTCCCGTAACAAGATGGTCCTCGATTGCTTTGGGTGCTGGAATCGGTATTGGATCTGCATACGCTGATTGTT
CTCGTCCCTTCGATTCTTCATCGTCAGCCACTTTGTTACCTCCACCCAAGTCTTCTTCTTCTTCTGTATCTCAGGCTGCAGAAGAGTAAGAGAA
GCGTGGGGGATAAACCCAAACATTGATGATGGGTTTCTAATACAAGAGTTGTTATAATTTTGTATGAAACTGGCTGTTGATCTTGCATGACATG
GCTTCTGAGATAATATATGCACACTGTTATACCTTTGCTTTTCAGTGGTTTTGTACACACTGACTAATGTTTATTGACACACCCATTCCGACTC
CTTTTTGG |
Primers for UN56457 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAAGATGGTCCTCGATTGC |
60.081 |
20 |
AATGTTTGGGTTTATCCCCC |
59.756 |
20 |
182 |
219 |
400 |
| 2 |
ACAAGATGGTCCTCGATTGC |
60.081 |
20 |
TATCCCCCACGCTTCTCTTA |
59.662 |
20 |
170 |
219 |
388 |
| 3 |
TGTTCTCGTCCCTTCGATTC |
60.195 |
20 |
AATGTTTGGGTTTATCCCCC |
59.756 |
20 |
122 |
279 |
400 |
|
|
