Simple sequence repeat (SSR)
>UN56534
GGGCAGAAGCTGCTTTTCTTCTTATTCCAAAAGCAAATCAAGAACGGAAATGGTGACTAGTTTTCTGTATCCACTGCCTCCGTCGGTATTGCTC
ACTACTATGACCGTCGTTAGTTTAGCCGCTCTGCCGTTTATGGTTTGGTCGGAAATGAGAGGAAATAATCTGAAATACTCAAAATTCAACAACA
ACAACAATAAGGCATCATCATCATCACAAAAACAGCGATTGGGCAGCAGCATCTCGAGCAGAGCCGGGATGCTTTTTCTATATACACCAGCGTT
TCTAGCCGCTTCAGCTTCTTTCTTTCTCTCACCTTCTGTAGATCTCAGGCTCCTTCTTCTCAAATCCGCACTGTCCCTCCATTTCTTCAAAAGG
GTCTTGGAGGTTCTGTTCATTCATAAGTACAGTGGAGGGATGTCCCTAGACGTAGCTTTCACCATATCAAGCGGCTATTTCTCATCCACGGCGT
TGGTGTTATACAGCCAAAGCTTCACTCTGGGACTACCCGAGCCAGCTTTGGATCTGAATTCCCCGGAGTTGTCATGTTT |
Primers for UN56534 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGTCGTTAGTTTAGCCGCTC |
60.039 |
20 |
ATAGAAAAAGCATCCCGGCT |
60.061 |
20 |
164 |
106 |
269 |
| 2 |
CGTCGTTAGTTTAGCCGCTC |
60.039 |
20 |
GTGCGGATTTGAGAAGAAGG |
59.813 |
20 |
248 |
106 |
353 |
| 3 |
ATGGTTTGGTCGGAAATGAG |
59.79 |
20 |
ATAGAAAAAGCATCCCGGCT |
60.061 |
20 |
136 |
134 |
269 |
|
|
