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Simple sequence repeat (SSR)
>UN56564
GGATACCATGAAGTTTTGTATGAATTAGTAGGAGAAGTGGTGAGAATTAAAGAGACTATTATGGGATTAGTGATGAACTCGCGAGAGAGAATGA
GAGAGAGAGAGAGAGAGAGTATCAAAGAGTAAAGAGGAATTATATTTCCCTGAATTGATTCAACATGTTACAAGGTCTATTTAAAGACTAGACA
AGAGATATTTCGACAAGGGAGAAAAGAATAAACAATGAGATAGTACAAGTAAAAGATTAAACAATGAGGAGAGAGGTCTGGTCGATCAGGCTCG
TTCAGATGGGCAGAAAGCGACAGGTCACAACGGTTCCCTGCGCTTGATCAGCTCCTCTCTTCCTTAGAAATCCCGTGACCTTCCTCAGCTTCTC
TCTTCCTTCTCATGTCGACATACTAAGCCTTCCTTGTCTATTTAAATAATACTTCACTCATTTAAAATCTCCCTCTCTCCCTTTGCCTTGCACT
TCAAGTGATTGCCTTGATATGCACTCTTCATCAAAGTCTCCTTGATAGCGTGTATACATGTGTTATCCTTTATTCTCTTCATGTCAACAGTTGG
CTCACTTGATTAACCGCAAAGCACACATCTGGTCCTGTTATGGTGAGATAGATAAGTTTTCCAACCATTCTTCTATAGTGCTTGACATCAGTGT
ATGGTTGATTATCAATCTCCCCCTCACGCATCACTTTATACCCATATTCAAGTGGAGTCTTTGCAGCT |
Primers for UN56564 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGATGAACTCGCGAGAGAGA |
59.812 |
20 |
TTGTGACCTGTCGCTTTCTG |
60.025 |
20 |
242 |
71 |
312 |
| 2 |
TGGGATTAGTGATGAACTCGC |
60.088 |
21 |
TTGTGACCTGTCGCTTTCTG |
60.025 |
20 |
251 |
62 |
312 |
| 3 |
TGATGAACTCGCGAGAGAGA |
59.812 |
20 |
TTCTGCCCATCTGAACGAG |
59.926 |
19 |
227 |
71 |
297 |
|
|
