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Simple sequence repeat (SSR)
>UN56739
GGAGCCAATAGGCTTAGAGTCACCGTAATAATTAAAAGAAACGCTCTCTCCCCTCGTGCGCCAGACTGACAAAGACTTCATAAAGAGAGATTCA
CAGAAACATAGAGAGAGATCAGAGCTTCTTCAATGGCAGCAGGAGGAGGAGGAGGCTCATCGTCTGGAATAACTCCAACGTGGAAGGAGAGGGA
GAACAATAAGAGGAGGGAGAGGAGAAGAAGAGCCATCACGGCAAAGATTTACTCTGGTCTCAGGGGTCAAGGTAACTACAAGCTTCCTAAGCAC
TGCGATAACAACGAGGTCCTCAAAGCTCTCTGTCTCGAAGCTGGTTGGATCGTCGAAGACGATGGCACAACTTATCGCAAGGGGTCTAAGCCAC
CAGCATCAGACATGTTAGGAACTCCGACAACATTCAGCGCAAACTCTTCAATCCAACCAAGTCCACAATCATCTGCTTTCCCAAGCCCAGCACC
TTCTTACCATGGAAGTCCCGTCTCCTCCCTTCCCTAGCCCGTCTCGTTATGACGGTAACCATTCCTCGTACCTTCTCCTCCCTTTCCTACACAA
CATCGCTTCTTCCATTCCAGTAAACCTTCCTCCTCTTAGAATATCAACAGCGCGCCTGTTACTCCGCCTCTGTCCTCTCCTACTTCTCGTGGCT
CAAGAGGAACTCATGACACACAGTTGCCAATTAGTGGGTGAGACATCC |
Primers for UN56739 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGAAACGCTCTCTCCCCTC |
59.957 |
20 |
GAGCTTTGAGGACCTCGTTG |
59.989 |
20 |
275 |
36 |
310 |
2 |
AAGAAACGCTCTCTCCCCTC |
59.957 |
20 |
CGTGATGGCTCTTCTTCTCC |
59.95 |
20 |
193 |
36 |
228 |
3 |
AAGAAACGCTCTCTCCCCTC |
59.957 |
20 |
CCGTGATGGCTCTTCTTCTC |
59.95 |
20 |
194 |
36 |
229 |
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