Simple sequence repeat (SSR)
>UN57007
CGAACAATACGGTGCTTTAATATACAGATTTATCAAATCACAAAGATACATATACAAAGGTGTTGTGGGAAAAAGCTTAAACTCAAGCCCACTA
CTATACACAATGGTGTAAAGAGGATAATTTTATATTACAACGAAATCAAAAGGAAAAAGATACAAACCAAACCTCTTTTCCAAGATAAAATTTT
ACAGATTCTTCTTCTAATCTTCTCCTTAATTATTAATGTATAAACAAAACGGTGACTGATCTTCATCTTCATCCTCCCTCTCTCTCTCTCTCAG
GAAAAAATGAAAAAAAGAAAACGCTAAATAGATATCACATATTCATTTGCTTCAAAAATGTAGTAGTAACACTAGTAATCAAATCCTTCTCTCT
GTTAGGGCCTTGGTCCGGAATCTCTCTCTACATACACTTGTTTTTTTTTGTTGGCTTTGTCTACTACCCCATGGCAGGGATGCTCGAGCTCTGG
CGGTCACGGTTCAAGCAATCGAACCCTTCTACTCTAACTGCAGGTGG |
Primers for UN57007 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGTGACTGATCTTCATCTTCA |
60.255 |
22 |
AGAAGGGTTCGATTGCTTGA |
59.813 |
20 |
263 |
238 |
500 |
| 2 |
CAAACCAAACCTCTTTTCCAA |
59.094 |
21 |
CCAAGGCCCTAACAGAGAGA |
59.425 |
20 |
233 |
157 |
389 |
| 3 |
CAAACCAAACCTCTTTTCCAA |
59.094 |
21 |
AGAGAGATTCCGGACCAAGG |
60.586 |
20 |
247 |
157 |
403 |
|
|
