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Simple sequence repeat (SSR)
>UN57384
GGAAAGTTGCAACCTTTAACTGCCAATCCCTCTCTCTCTCTCTCTCTCTCTCGGGTGCTCTGTTCTTAGCTCCTCAGTAGAGTACGGCAAAAGA
TAGCTTCTTGTAGGGTTTATTCGCCCTTATTCTTAGCGTAATTCGATTCTCCGTGATTCTCTCTAGATCTCCCTAGTCTACTTGAATCGTTGGA
TTTTGATTTGGTATTATCACAGTAGAGGAGGATCTGAGTATTTGATTAGTTGGGGGAACGCTAAAGATTCGAACTTTGAATAGAATCTCAGATT
TTGCAGTGGTGCTTAGTGTAAGATTCTATCGAATTTTCAGGTGGGTTTAGGGTTTGATTGTGTAAAAAAGATGGCTGTGGAGGAAGTTAGTGAT
GGTGGTTCTGCTGCGTGGAGCAGGGAAGATGATATTGCGTTCGAGAGAGCTCTTGCTAGTCATACAGATGAATCAGATGAGAAGTGGGAGAAGA
TTGCTGCTGATGTTCCGGGGAAGAGTGTTGAGCAGATTAAAGAACATTACGAGCTTTTGGTCGAAGATGTTAGTAGGATTGAATCTGGATGTGT
GCCACTTCCTGACTATGGTTCTTCTCCTGAAGGATCTAATGGTCATGATGGTGGTGGTGATGATGGAGTAGCGGTAAGAAAGGAGGGAACAGTC
ATGCGGGCGAGTCTAACCAGGGGAGTAAAGCGAAGTCA |
Primers for UN57384 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGCAACCTTTAACTGCCAA |
59.344 |
20 |
CGTTCCCCCAACTAATCAAA |
59.795 |
20 |
242 |
7 |
248 |
| 2 |
TTGCAACCTTTAACTGCCAA |
59.344 |
20 |
ATCTTTAGCGTTCCCCCAAC |
60.32 |
20 |
250 |
7 |
256 |
| 3 |
TTGCAACCTTTAACTGCCAA |
59.344 |
20 |
TTTAGCGTTCCCCCAACTAA |
59.581 |
20 |
247 |
7 |
253 |
|
|
