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Simple sequence repeat (SSR)
>UN57554
TCTGTGTCTCCATCAGCACCATTATACAAAACACTAAATCCTCTCAGTAGCACGTCCACTAGCATCTGCATCTTCATCCATATCTCCAAGCCAT
GCCTTAAGACTCGCTTCTTTACCAGCCTTAAACTCCTCAAACTTTGTCTTCTCCACCATATGTTGTTCACCTTTGCTTAAGACTTCTTCTTCTT
CTTTTTCTTCTAACTCATTGCTTTCCACATTGGGGATAGTCTCCACCTTCTGTTCTTTGAAGTCAAGCTGTGGCCATTTGATATTGCTTGCTTT
CTCCTTAGCCGACTTGAACACCGATGTGAAATAGCTGCCGCTTTCGCTAGTATCCTGACTATAATCAGAACCACGCATTGTTGTTGTTGTTGGT
GTTGCTATACTGCTGCTGGATCTGGTGCTCCAAGAGCTCCCGGTATTGAGGATGAGCCCTCTCCTCGGTTGTTTCGAGGACATTAACGCTAAGG
AGCTCTTGATGTCTCCTATCATCCCATCAGCTATAGGAGAACCACACTCTTTCATCGATTTCACCATGGCGATAGACTCTTCCGAGTCTTCGGT
ACGGAGAGCAGTTTCACGGGACTTGTCCAAGACTTGGGCGTTGAGGTTGAGGACGTTGGGTGCTGCGTTGCGGACGTGCTGCTGGATGTAATAA
AGCCCCACAGAGGGTTCGTTAGCAATGTACTTAATCATCTCGGCTAAGCACTCGTTTATCTCCGAAAACCATCAACAGTAGA |
Primers for UN57554 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCGCTTTCGCTAGTATCCTG |
59.996 |
20 |
CTCTCCGTACCGAAGACTCG |
60.005 |
20 |
253 |
320 |
572 |
| 2 |
CCGCTTTCGCTAGTATCCTG |
59.996 |
20 |
TGCTCTCCGTACCGAAGACT |
60.012 |
20 |
255 |
320 |
574 |
| 3 |
CCGCTTTCGCTAGTATCCTG |
59.996 |
20 |
CTCGAAACAACCGAGGAGAG |
59.982 |
20 |
135 |
320 |
454 |
|
|
