Simple sequence repeat (SSR)
>UN57611
AAATGAAAACACATTCATATTAGTGTCGAATAGTTTTGAGACCGAACACACAAGATTTCCACAGAACAGAGTTTTACTAAGAAGAAAAAACAGA
GCAAAAACATTTTAGCTTAAAAAAAAACAATAGAATACATAGGTTTGTTATCTTGCCCCTATTCCTCACTCTTGGACTTTCTTCTTCTTCGATT
TCTTCTTGCTCTGAGTCTGGCCATCATCAGTCTCCTCCTCTCCTCGAGACTTCCTCTTCTCTTTCTTCTTCTTATTCTCTGACTTGTCCTCATC
AACTGCCTCCTCTTCTTCACCCTTTGCCTTCTTCTTCTTCTTGCTTTTCTTTCCTGAGGCCTCCACTGTCTCCTTCACTTCCTCATCTTTGTTT
TGGAGATTCTCTATCACCTCCTTCATTACATCCGCGTTCTTACGTGGGGCAACACCCTTGGCATAAAACTCCAGCCTTTCCTCTACCTGTTCCC
TAAGCTTCTCACCAAATGCAGTTGTTGCGC |
Primers for UN57611 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCTCCTCTTCTTCACCCTT |
59.817 |
20 |
ACGCGGATGTAATGAAGGAG |
60.096 |
20 |
127 |
287 |
413 |
| 2 |
GCCTCCTCTTCTTCACCCTT |
59.817 |
20 |
CACGTAAGAACGCGGATGTA |
59.752 |
20 |
136 |
287 |
422 |
| 3 |
TCAGTCTCCTCCTCTCCTCG |
59.657 |
20 |
ACGCGGATGTAATGAAGGAG |
60.096 |
20 |
199 |
215 |
413 |
|
|
