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Simple sequence repeat (SSR)
>UN57638
GGTGATCTTTAATCTTTTATTCGAAAATCGTAAAAATCCCCAACAAACTAAAGTAACAAAGAAAGAAAAAAAACTCAACTCAAGGAACAAGCTT
TGAATATTCACTAAAATCCTTTATACATCTTTCTTACACCTAAACCGTAAAGCACACACTACTACACCAAACGGTTTTCTTCAGACGTTACCTA
TGAGCAGTTGGTGTACGCGGCACGGTGTAGGGCATCTGACCCATGTTCACCGGTGCACCAGGGACTGGAGCAGCATGGACTCCAAAAGCCAAGT
GAGGTGGAGCTGGGAGGTTCACTGGCGTGCCAACTGCTGAAACCAGCGGTCCAGTTACTGGTTGACCTATGCTGGGTGTTGTTCCATACATAGG
AGGAGGTCCTGGTGGTGGTTGAAAGGAGGCTTGCTTGGCTGGTTTGTTTCCTCCTCCAGCAACAGCAACAGCAGAACCTGTGTTGTTGTTGTTG
TGGTTGTTGCTGGTGTTGTTCTGACCAGTGATGGGTCCTTGTTGAGTTGAGACATCTGCATCGCCAACACTGGTGATGTCGTGAATGCTTGATC
GTCTTCTGTCTTTGTTCATTGAGTTTAGACGGATGAAGTACTTCTGAGCGTGGCTTGCGACTTGGGTTGGTGTTCTTGTTACCACAAAGTTGCG
AG |
Primers for UN57638 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGGTTTGTTTCCTCCTCCA |
60.081 |
20 |
AAGAACACCAACCCAAGTCG |
60.005 |
20 |
227 |
415 |
641 |
2 |
TGGTTTGTTTCCTCCTCCAG |
60.081 |
20 |
AAGAACACCAACCCAAGTCG |
60.005 |
20 |
226 |
416 |
641 |
3 |
ACTGGTTGACCTATGCTGGG |
59.989 |
20 |
AAGCATTCACGACATCACCA |
60.12 |
20 |
222 |
339 |
560 |
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