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Simple sequence repeat (SSR)
>UN57688
GGACGCACGACTCTCAGAGAAAGAGTCCATCCTCCTCCCTCTTCTCCCCATCGAAATAAGGAGAATTGAATAAATATGCAGTCAACGAGTTGCT
GCTGAAGGAGAAACTCAGATCGAAATTTAATATTAAATTAAGACTTGCAGCTTTGTTAGATAGAGACATGTTGTGTTTGGAATGGAGTTGTTAT
GATGATATCTCAACTAGTTTTGCACATCTCGCTGAGTGGCATCCTCTCGAATCGTTAAACTTCTCCTAACCCCTCTTTTTTTCTTAACTCCCTC
GTGGTTCTTCAGTTTTTTTTTTTTAATATTTCAGTTAGTTTAATTGTTTTGTTTCTTTGGGGAGAAATGTTTCGTGATAGTCTTTGGTTTTCCC
GTACCATTGGTTGTTTTGGATGCTTTGGTACTTCTACTAGAACCCCACAATCCCCTGAGCGTCCTCCACTCAAACCTGATTCACCTTCATCTAC
TACTGATGAGGCTACTAGCAGTTCCATAAGCGATGATGATGATCAAGAAGAAGAAGAAGAAGTGGTTGAGCAGAAGAGCCGTTCTAAACGATCT
GACGAAATTTTGAAATTTAGATTAGATCATGGATTGATCTGCAGGCAAGTTCCTGTGAAAGTCACTAATCAACTTATCCGTGGAGAGGATGAAG
ATGGTAACAAGATGATCAATGAGTATGTTCGCGAGTGTAAA |
Primers for UN57688 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTAGAACCCCACAATCCCC |
60.052 |
20 |
ACAGGAACTTGCCTGCAGAT |
59.874 |
20 |
209 |
412 |
620 |
2 |
TCCCGTACCATTGGTTGTTT |
60.088 |
20 |
ACAGGAACTTGCCTGCAGAT |
59.874 |
20 |
248 |
373 |
620 |
3 |
TTCCCGTACCATTGGTTGTT |
60.088 |
20 |
ACAGGAACTTGCCTGCAGAT |
59.874 |
20 |
249 |
372 |
620 |
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