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Simple sequence repeat (SSR)
>UN57905
CAAGCCGCAAAGCCTCTTAAGACAGACGCTTCTTCACCCTTGCAGATTTCGCTAACCGATTCTTAAGATGTTCTCCGCTCAGAACAAGATCAAG
AAGGACAAGAATGCCGAGCCGACAGAATGCGATGTGCAAGTTGCTCAGGCTTTGTTTGATTTAGAAAACACCAACCAGGAGTTGAAAAGCGAGT
TGAAAGATCTTTACATCAACCAAGCTGTTAACATGGACATCTCTGGAAACCGCAAGGCTATTGTGATTTACGTCCCGTTCAGATTGAGGAAAGC
TTTCCGCAAGATCCACCCCCGTCTCGTTAGAGAGCTTGAGAAGAAGTTCAGTGGAAAGGATGTTATCTTTGTTGCCACAAGAAGGATCATGCGT
CCACCAAAGAAGGGTGCTGCTGTTCAGAGGCCACGCAACAGGACTCTAACCTCTGTTCATGAAGCTATGCTCGAGGATGTCGCTTCCTGCTGAG
ATCGTTGGAAAACGTACTCGTTACCGTCTCGATGGTTCCAAAGTCATGAAGGTGTTTTTGGAGGCCAAGGAAAGGAACAACACAGAGTACAAGC
TCGAGACTATGGTGGGAGTCTACCGCAAACTTACTGGAAAGGATGTTACTTTTGAGTACCCGGTTGAAGCTTGATGATGGATGATGCTCTGGAG
AATCATCATCATCATCATCATCATCATGATAGAGAAGAGAGGTTTTGAATTTATATGTT |
Primers for UN57905 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATGTCGCTTCCTGCTGAGAT |
59.981 |
20 |
CATATAAATTCAAAACCTCTCTTCTCT |
57.068 |
27 |
263 |
453 |
715 |
2 |
TTTGAGTACCCGGTTGAAGC |
60.11 |
20 |
CATATAAATTCAAAACCTCTCTTCTCT |
57.068 |
27 |
101 |
615 |
715 |
3 |
CGTCTCGATGGTTCCAAAGT |
60.111 |
20 |
CATATAAATTCAAAACCTCTCTTCTCT |
57.068 |
27 |
221 |
495 |
715 |
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