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Simple sequence repeat (SSR)
>UN57963
CCCCCCGCAGGGTAGGATGATGCAAGGAACGCAGGGAATGATGGGGACGATTGGGTCAGGCTCTCAAATGCGGCCAAGTGGAATAATGCCTCAG
CATCAGCAGAGACCGGGTCAAGCCTCTCTGAGACCAGCTTCTTTCCGAGTAGTCCATCTCCTGTTCCTCAAAACTTTCAAGCGCATGGCCTAAT
GAGACCTTCATCTATTGGTTCTCCTGGTGTCCAATCTACTGGTGCAGCACAGCACAGCTTGCAAGCCACTAATCAACCATGGTTATCATCTTCT
GCCCAAGGGAAGCCGCCTTTGGCACCCCCTTCTTATAGACCGCAAGTAAATAATAATCCCTCCTCCATGCAACAAAGATCTCATGTTACCCAGC
AACATCTTTCCACGTCACCAGCGACTTCACAGCCTCAGCAACAGCAACAACAACAACAACAACAACATCAGCTTCAGCCTCAAGAACAACATCA
ACAATTGAGACCTCCGCATCAGAATTTACCTTACTCACATCAACCGGCCCGGGTCCAAGGGTTGGTAAATCAGAAAGCTGCTTCTCCAGCAATG
CCGACCCCGCCCCCTGTGCCTCAACCAGGAAGCCAAGCTAAGCCAGTTTCAGTAGAGAATGAGAGTCTGATGATCGTATCCTGGGGAAAGAAGC
ATCCATGAGCTACTTCAACAGATTGATCCGTCAGAGAAA |
Primers for UN57963 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCCAGCAACATCTTTCCAC |
59.973 |
20 |
ATTTACCAACCCTTGGACCC |
59.919 |
20 |
171 |
370 |
540 |
2 |
TAATCCCTCCTCCATGCAAC |
59.894 |
20 |
ATTTACCAACCCTTGGACCC |
59.919 |
20 |
205 |
336 |
540 |
3 |
CTTTGGCACCCCCTTCTTAT |
60.312 |
20 |
ATTTACCAACCCTTGGACCC |
59.919 |
20 |
242 |
299 |
540 |
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