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Simple sequence repeat (SSR)
>UN58047
GCGCATTATTATTACACACTCATCTAGAGAGAGAAAAGAGACATCTTGAGATGGAAGGCAAAGAAGAGGATGTTAGAGTCGGAGCCAACAAGTT
TCCGGAGAGACAACCGATCGGAACATCGGCTCAGAGCGACAAGGACTACAAGGAGCCACCTCCTGCGCCCTTGTTCGAGCCCGGCGAGCTTGCT
TCGTGGTCCTTCTGGAGAGCTGGTATCGCTGAGTTCATCGCCACGTTCTTGTTCCTTTACATCACTGTTTTAACCGTCATGGGAGTCAAGAGGT
CACCGAACATGTGTGCTTCTGCCGGAGCTGAGATTATTGGAACTTTTGTCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAGAGGAACGC
TCGTGACTCTCATGTTCCCATTCTTGCACCTCTCCCTATCGGATTCGCTGTGTTCTTGGTCCACTTAGCAACCATCCCCATCACTGGTACTGGA
ATCAATCCAGCGAGGAGTCTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGGGACGACCATTGGGTGTTTTGGGTTGGACCATTCATCG
GTGCTGCACTTGCCGCTCTTTACCACGTGATTGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTGATTGAGTTACTCTTAGTTTGCTTTTCT
TTTGTGAATGTACTACTACTACTACTACTACTACTTGTGTGAACATCGTGCATGTGTTTGTTCCTCTTCTTTGCCTAATGCAGACTCTATTTGT
AATACAGAGTCAGAGACATCCCCGGA |
Primers for UN58047 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTTGGGTTGGACCATTCAT |
60.029 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
181 |
543 |
723 |
2 |
AACCATCCCCATCACTGGTA |
60.05 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
278 |
446 |
723 |
3 |
TCAATCCAGCGAGGAGTCTT |
59.95 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
252 |
472 |
723 |
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