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Simple sequence repeat (SSR)
>UN58053
GGGCCCCAAACGCCTCCGCCTTCGGCAAAAATCTCTGGTCTCTCCGTCCCTCACGTCAACAGCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCT
CTCCCATGGCTTCTGGCTCACTTCTTCCTCGTCTCTGATCAGTGGCAGCTCTTCTTTATTTCCCCTAAAATCTCATCACACGTGACTTCCTCGC
ATTTCCTCTCTCCATCACCGATGAATCTGAGGAAATTCTCTCGCGCAAGCGAGACGCTCACTCTCCGCTTGAGATCCACACCACACGCGCGAAG
AAACTTCCACATAACCCGATCGGCGGAAGAAGTTTCCTCCGATCAGCAACATTTACGCCTACGGTTATCCGCGGCCTTATCAAGAAGATCTCTA
GATTACAAGCACTGCAAACAACTCATTACCACCTTATCGCCTCGCGAGTTCGATAGATTGTTTCCTGAGCTCAAATCCAAAGTCAATCCCAAGA
CGGCTTTGGATTTCTTCAGATTAGCGTCCTCTGATTCGTTTGGCTTCTCCTTCAGCCTCCGTTCGTACTGCTTGATGATAGGTTTACTGCTCGA
ATCGAATCTGTTATCTCCCGCTAGGTTACTTCTGATTCGTTTGATCAATGGAAGCGTTCCGGTTTTGCTGCGTTCTGATTACGACGATTCGAGT
CGAGTCGCGGTTGCCGATGCGATGGCGAGTTTGAGTTCGTGTTTTGATCAAGAGA |
Primers for UN58053 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCGGCAAAAATCTCTGGTC |
60.192 |
20 |
AAGAAGTGAGCCAGAAGCCA |
60.134 |
20 |
100 |
21 |
120 |
2 |
CGGCAAAAATCTCTGGTCTC |
59.813 |
20 |
CGTGTGGTGTGGATCTCAAG |
60.154 |
20 |
253 |
23 |
275 |
3 |
TCGGCAAAAATCTCTGGTCT |
59.813 |
20 |
CGTGTGGTGTGGATCTCAAG |
60.154 |
20 |
254 |
22 |
275 |
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