 |
Simple sequence repeat (SSR)
>UN00523
TTTTTCTTCTCACCTTTTAATTTCTCATGGACATATCTCAAGAACTCTATGCCAATGGTGACCAGAACTTAGAAGCAAACCTGATAGAGGCAAC
TGAATCATCATCATCATCAGTATCTCAAACCTCAGACAACGACCAAAATCAACAGATACAGATTTCAACCAGTCCCCTTCCTTCACAACCCTTG
TATCAGTATACATGTGCACTGGACTTCTACTGTCTGCTTACGCTTATCTCTATGCAATTGGTTTACTCTACTTACCTGTTTCCACTTTCTCCCT
CATCTTAGCCTCGCAATTAGCATTCACTGCCTTCTTCTCTTACTTCTTAACTCACAAAAGTCACTCCTTCATAGTCACTCTTTGTTCTCCTCAC
TGTCTCCTCTGCCCTCTCGTGGTTGACACCGAGTCACGAGACACAACCAATGTCTCTAGAGTACAGTACGTGATAGGGTTCGTATGCACCATAG
GTGCTTCAGCTGGGATAGGACTGCTTCTATCTTTGATACAACTCCTCTTCAGGAAGGTTTTCAAGGAGCATACATCGTCAGTAGTCATGGACTT
GACCATCTACCAGTCTCTAGTCGCGAGCTGTGTTGTTCTCATCGGTCTTTTCGCGAGTGGAGAGTGGAGAACTTTGCCTAGTGAGATGAGAAAC
TCCAAACTCGGGCAGGTGTCGTATGTTGTGACCTTGGCCTCTGCAGCTATCTCTTGGCAAGTCTACACTGTTGGTCTGGTGGGTTTGATCTTTG
AGTCGTCCTCTGTGTTCTCCAACTCCATAACCGCCGTGGGGTTGCCTATAGTGCCAGTCATAGCTGTGATAGTTTTCCATGATAAGATGGAAGC
ATCGAAGATCTTCTCCATCGTTTTAGCTATATGGGGCTTCCTTTCGTTTGTCTATCAGCACTATCTTGATGAGAAGAAGCTGAAGACTTGTAAC
ACAGACCCTGTCGAGGATGATGGTACACAAACTTGGTGAAACGTTGCTGTATGAATGGGTTACACAAACAAACGAACATAAAAAGTTGTTCGCA
CGTTTATGAATGTATCTATTATGTGATTTTGTAATGGTCCATGCGAGTGGGACACATGTCTCTATGTACAGTTTGAGTTTATTTAAATAGTGCA
CGACTCTGTTTACAAAACTTCAGTAATTAAAACTTTGAGTTCATAGCAGCCAAAGACCAGTAGTATTACCAAATGTGATTCAGTCCTGTATATA
AAGAGAGAGTGTAGGCTTTGTAGCTATATTCAAAGTTATTGTAGACAATGCATGTGTGAGGATGGTTTCTGAAATGAGCTTTACATGAGGCAGC
CAACATAGTGAGCACGAGGGTAGTTGTTTTGGAGATGTGGCCATTGAACAAAGAACTGATCAGCAATCCTTAACTTATACAGAAGCAATCCACT
TAAAGAGAGCTTCTTAACTCTTGCTACACTCTCAACATAAAAGATGCATGACCATCTGATTCCCAGCACCTTGAACAAGAAAGCGATCACACAG
AGAGGAATACAGGTCCCAGGACCATTGCAAAGGATCAGTTGGGGTCTGATCCGGATCATGAGGGAAAGAGCATGAACAATAGCAAGAATAGTAG
TCCAAACAGAAGTCACATAAGACTGACCAACTTCTCTACTCCGGTAAATTTGTGTGAACCGTAAGGAGGCTTCCTTAACACCAGGCCTGTGAGG
TAGAGAGTGTTCAAAGGAACGAGCTTTGTGGAGACTCATGTTATCAGAAGCAGCAGCGACGTAAAACCTGGGTGTATATCTATCCATCCGCATC
ACGGAGAGGAGACTCAACATCTCTGCCGTGTGTCCCCCAGAACCAAGAACAATGAGAGTACTGAGAGAAGGCGGTGAAGCTCCTTTGGGAAAAG
GTTTGCCACATCGGTACAGAACATACAGCACACGAACCGTTAGAAAGATTGAGAAGATGATTAGGAATGAAGCGAAGGTGCATTTGGAGAGTAT
TTTCGAGTAAATGCAGCAATGGTGTTCCTCCATGTTTCCTCTCTCTCTCTTCTCCTTCCAAAAGCGGAAACAGAAGATCTAAGACGGAGACGGG
AACTCCGGCGGTGTCGGAATCGAGATGGATCCC |
Primers for UN00523 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGCACACGAACCGTTAGAA |
59.904 |
20 |
ATCCATCTCGATTCCGACAC |
59.893 |
20 |
193 |
1906 |
2098 |
| 2 |
TCGAGTAAATGCAGCAATGG |
59.833 |
20 |
ATCCATCTCGATTCCGACAC |
59.893 |
20 |
122 |
1977 |
2098 |
| 3 |
CGAAGGTGCATTTGGAGAGT |
60.255 |
20 |
ATCCATCTCGATTCCGACAC |
59.893 |
20 |
146 |
1953 |
2098 |
|
|
