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Simple sequence repeat (SSR)
>UN58084
GGGCCGGCCACTAAAAAGGCAGTCAATCATCGGCGAAGAGACTCCGAGAAGAAGAAGAAGAAAAAACGTTCGCGGAGGTGTGACCTGAGATCAC
GAAACAAACAATCTCCTACTCGACAATTCATCACACCATGTGGAGAAGAATCGTCACTTCTCATCTCAAAACCCTAGCCGCCGATGTCGCCTCT
GCTTCTCCTCGTCGATCCATAGCCACCACCACCACTACCGCGAGACAACACGTTGGCTTCCATCACGCCGCCAATCCCGCTTCTTCTTCCGTCA
TCCCTCGCTGTTTCAGCTCTGAATCAGTAGAGACAATAGGGAAGAAGAAGGTGGAGGATGTTATGCCCATTGCAACTGGACACGAGAAGGAGGA
GCTTCAAGCTGAACTTGAGGGGAGGAGGCTGCTTGACATTGACTTCCCGGAAGGTCCTTTTGGTACTAAGGAAGCTCCTGCTATAGTAAAGTCT
TACTATGACAAGCGAATTGTGGGATGCCCTGGTGGTGAAGGCGAGGATGAACACGATGTTGTGTGGTTCTGGCTGGAGAAAGGGAAGTCTTTTG
AATGCCCAGTTTGCACTCAATACTTTGAGCTAGAAGTGGTTGGTCCAGGTGGGCCTCCTGATGGTCACGGTGATGGAGACGATGAGCATCAACA
CTGATTCCACAGCTTCTCACTTTTACTCTCTGTTTTCGTATATTTTTACAATTTTTACTGGA |
Primers for UN58084 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAAGGCAGTCAATCATCGG |
60.074 |
20 |
CGGCTAGGGTTTTGAGATGA |
60.206 |
20 |
161 |
14 |
174 |
2 |
AAAAGGCAGTCAATCATCGG |
60.074 |
20 |
ATCGACGAGGAGAAGCAGAG |
59.703 |
20 |
191 |
14 |
204 |
3 |
AAAAGGCAGTCAATCATCGG |
60.074 |
20 |
GCTATGGATCGACGAGGAGA |
60.326 |
20 |
198 |
14 |
211 |
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