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Simple sequence repeat (SSR)
>UN05230
CGGGGGGAAGGAAATAAGAAAGCGCGAGCGAGAGAGAGAGAGATGGCGACGAAGACTGTTTGGATCGTACTGTGTTGTTTATTCGTTATTGCAC
AGGCAGATCAAGGTGGTTTCGATGTTCGTCATCACTTATCCACCGTCACCAGATACTCTGTTTCGAAAGATGTTACACAAAATTTAATTGAAGG
GTCAAATGTCCCCAGCGAGTGTACACCTATCCACCTTAACCTTGTGGCTAGGCATGGGACTCGTTCTCCGACCAAGAAAAGGTTGCGGGAACTG
GAGAATTTAGCTGGCAGGTTAAAGGAACTGTTAAGAGAGCTGAAGCTAGGAACTTGCCTTCAGACAAGATTCCTGGTTGGTTAGGAAGATGGGT
ATCTCCTTGGCAAGGGAAAGTGAAAGGCGGAGAGCTGATCAGTCAAGGCGAGGATGAATTGTACCAGCTTGGAATCAGGGTTAGGGAACGGTTT
CCTACTTTGTTCGAAGAGGATTATCACCCTGACGTCTATACCATTAGAGCTACACAGATTCCTCGGGCATCTGCAAGTGCTGTGGCATTTGGAA
TGGGTTTATTCAGCGAGAAAGGAGGTCTGGGACCAGGTCGTAACAGAGCATTCGCTGTCACTAGTGAGAATCGTGCTAGTGATACCAAGCTGAG
GTTTTTTGAGTGTTGTCAAAACTACAAGAGTTATAGAAAAGCTAAAGAGCCTGCTGTGGATAAGCTCAAGGAACCTGTTCTGAATAAGATTACA
GCTTCCGTTGCAAAGAGGCATGATTTAAGTTTCACGAAACAGGACATTTCCTCTCTCTGGTTCCTGTGCAAGCAGGAAGCATCACTGCTTAATG
TAACTAATCAATCTGTGAACTTTTCACGCCATCTGAGGTTGCTTTGTTGGAATGGGCAGATGACTTGGAAGTGTTTATTCTCAAAGGTTATGGA
AACTCCTTGAACTACAAAATGGGAGTTCCATTGCTCGAAGATGTTTTGTATTCGATGGAAGAAGCTATCAAGGCCCGTGAAGAAAATCTTCCAC
AAGGAAGTTACGAGAAAGCAAGACTTAGGTTCGCACATGCCGAAACAATAGTTCCCTTCTCTTGTCTTCTTGGGCTTTTCCTTGATGCATCTGA
GTTTGAGAAAATACAGAAGGAGAAACCATTGGAACTCCCTCCCCAGCCTCCTAAAACCAGGGACTTTAAAGGCAGCACCATGGCTCCTTTTGGT
GCGAACAACATGCTTGTCCTCTACAGTTGTCCTGCAGCTTCCTCGCCTAAGTACTTCGTCCAGGTTTTGCACAACGAGAATCCTATTGACTTCC
AGGTTGTGATGGAAAAGATTTCTGTCCTCTTGAAGATTTCAAGGCCAAAGTGGTGACCCCTCATCTCAAGCATGCTTTTAACAACCTCTGCAAT
GCTAATCTAGATGACCCTAAACATAAGCATCCATCAATTTAAGCTAGTTCACTTCGCTAATTTGAAATGGTTCGAGAGGCATTTTACTCAAGCT
TGATTTTGATCTCTGAATCCCTTTTCTTGCTTGGTAGAAACCAAAAGCTTTGAATTATATCCTAAGGACGTGTAGATATTAAACCAAAACCATG
TGCTATATGTTCATTTTGTTTTTGATTCCAAGCCTTCTTGGAGAAAAATAAGATTAGTAAATGATCTAAAGACTGAG |
Primers for UN05230 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGGAAATAAGAAAGCGCGA |
59.101 |
20 |
GTACACTCGCTGGGGACATT |
59.997 |
20 |
205 |
8 |
212 |
| 2 |
AAGGAAATAAGAAAGCGCGA |
59.101 |
20 |
GACGAACATCGAAACCACCT |
59.973 |
20 |
117 |
8 |
124 |
| 3 |
AAGGAAATAAGAAAGCGCGA |
59.101 |
20 |
TGGTGACGGTGGATAAGTGA |
59.96 |
20 |
138 |
8 |
145 |
|
|
