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Simple sequence repeat (SSR)
>UN58128
GGGAAAATTTTCGGAAAAATCTCGACACGTTTCCGCAAGAAGAAGATGACTGGAGTTGATGATGGCAAGGAGTTCAAGGATGAAACCGTGATTC
TCAGCGACGACGATAGTGAAGTGGAAGAAGTTAAAGACGGAGGAGAAGAAGGTTCCAACGACGAACCAGAAGTCGATGGTAGTGAAGGTGACGA
CGATGACGATGATGATGATGATGAGGAAGATGACGACGACGAGGTCCAGGTTCTGCAGTCCCTTGGTGGGCCTCCGGTACAGTCGGCTGAAGAT
GAAGATGAGGAAGGAGAGGAAGACGGAAACGGAGACGACGGCGACGACGATGACGATGATGATGACGACGACGACGACGATGATGACGACGAGG
ATGAAGACGGTGAAGATGAGGAGGATCTTGGGACAGAATACCTAGTCAGGCCAGTTGGTCGGGCTGAAGATGAAGAGGACTTAAGTGATTCTGA
GCCGGAAGAGAACGGTGTTGAGGAAGACCTTGACGAAGGTGAAGACGACGAGAATGATGACTCGGGTGCTGGAAAATCTGAGGCTCCTCCCAAA
AGGAAGAGAGGAGCTGCTGATGAAGAGGAAGAGGAGGATAGTGATGATGGAGATGATGCAAGACCTCCA |
Primers for UN58128 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACGTTTCCGCAAGAAGAAGA |
59.993 |
20 |
GACTGCAGAACCTGGACCTC |
59.841 |
20 |
222 |
27 |
248 |
| 2 |
TCTCAGCGACGACGATAGTG |
60.16 |
20 |
GACTGCAGAACCTGGACCTC |
59.841 |
20 |
156 |
93 |
248 |
| 3 |
CTCAGCGACGACGATAGTGA |
60.16 |
20 |
GACTGCAGAACCTGGACCTC |
59.841 |
20 |
155 |
94 |
248 |
|
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