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Simple sequence repeat (SSR)
>UN58128
GGGAAAATTTTCGGAAAAATCTCGACACGTTTCCGCAAGAAGAAGATGACTGGAGTTGATGATGGCAAGGAGTTCAAGGATGAAACCGTGATTC
TCAGCGACGACGATAGTGAAGTGGAAGAAGTTAAAGACGGAGGAGAAGAAGGTTCCAACGACGAACCAGAAGTCGATGGTAGTGAAGGTGACGA
CGATGACGATGATGATGATGATGAGGAAGATGACGACGACGAGGTCCAGGTTCTGCAGTCCCTTGGTGGGCCTCCGGTACAGTCGGCTGAAGAT
GAAGATGAGGAAGGAGAGGAAGACGGAAACGGAGACGACGGCGACGACGATGACGATGATGATGACGACGACGACGACGATGATGACGACGAGG
ATGAAGACGGTGAAGATGAGGAGGATCTTGGGACAGAATACCTAGTCAGGCCAGTTGGTCGGGCTGAAGATGAAGAGGACTTAAGTGATTCTGA
GCCGGAAGAGAACGGTGTTGAGGAAGACCTTGACGAAGGTGAAGACGACGAGAATGATGACTCGGGTGCTGGAAAATCTGAGGCTCCTCCCAAA
AGGAAGAGAGGAGCTGCTGATGAAGAGGAAGAGGAGGATAGTGATGATGGAGATGATGCAAGACCTCCA |
Primers for UN58128 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGGTCCAGGTTCTGCAGTC |
59.841 |
20 |
CTCTTCATCTTCAGCCCGAC |
59.95 |
20 |
225 |
229 |
453 |
2 |
GAGGTCCAGGTTCTGCAGTC |
59.841 |
20 |
CTCTTCCGGCTCAGAATCAC |
59.95 |
20 |
252 |
229 |
480 |
3 |
TGATGAGGAAGATGACGACG |
59.787 |
20 |
CTCTTCCGGCTCAGAATCAC |
59.95 |
20 |
274 |
207 |
480 |
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