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Simple sequence repeat (SSR)
>UN58148
GGATCTCATCCACATTTCTCTCACCCACTTTCTCTCTCTCTCTCTCTCTCTCCGCGCTTTTGTATTTTTAAAATAGTGAGAATCTCAAAAATAA
AATAAAAAAACATTTGAGAGAAAAATGGAGAAAGGAGATCGTGAGAGACAGGGAGGCAGAGCCGAAGGAGGAGATAATTTTTGGGTTTGGAGAC
TCCTGAGAAACATTGGCGTTACCTTCTCGTGATTTCAATTCTTCATTCTACACCTGAAGGTGTCTCATCACCTCGTCATGGTGGCCACCTCTGC
TACATCCTCATTCTTCCCTCTCCCATCTTCCTCTCTCGACAACCCTAATGGCAAAACCAACAAAGTCACCTCCACTAACTTCTCTGGTCTCAAT
CAAGCACCAAGCTCTGGCGGTAGGATGAAGGTCATACCCAACGCCCAGGCTCCACCCAAGATCAACGGCAAGAGAGTTTCTTTCCCAGGCTCAG
CAGCACACATCGTCAAGACTGATAACAACCACGATGTCACGCAACAGCACGCGCCCAGAACGTTCATCAACCAGCTACCTGACTGGAGCATGCT
TCTCGCCGCCATCACGACCGTCTTCTTGGCCGCTGAGAAGCAGTGGATGATGCTCGAATCGAAACCTAGGCGTTCCGATATGATTATGGAGAAT
CGTTTTGGTCTAGGAGATCGTTCAAGA |
Primers for UN58148 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCATCCACATTTCTCTCACCC |
59.918 |
21 |
CAGGAGTCTCCAAACCCAAA |
60.081 |
20 |
188 |
6 |
193 |
2 |
TCATCCACATTTCTCTCACCC |
59.918 |
21 |
CACGAGAAGGTAACGCCAAT |
60.132 |
20 |
214 |
6 |
219 |
3 |
TCATCCACATTTCTCTCACCC |
59.918 |
21 |
CGAGAAGGTAACGCCAATGT |
60.132 |
20 |
212 |
6 |
217 |
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