Simple sequence repeat (SSR)
>UN58593
CGCTCCAAAACTCCTTTATTCAAATGTTCAAAAACAACATCACACTTTGAAACCAAACACACAACAACAACAACAGCATTAAAAAAGGAAAGGA
AACTTGAGAAAAGCAAGACAACTCTCAGTTCAAAGTTGCTTGCGCCAGATTCCGATTCCATCAGTTGGGCAAAGACTAACCTGAGGACACTGAT
ACTTCTCCAAAAACTCCAGTTTAGGAAAGTACGTTTTGCTCAGGTCCCTCCACTCCACTTTCAGCTTGGGAAGAAACTTCAGACGTAAAACACT
GACATTGCAACCAGTTGGATTCACAGGTAACGCTCCAAATCCAGTAAGTTCTGTTCCTCCTTTGATGTAAAGCTTTTCCAGATTAACTAGTCTT
CTAGGCACAAGCCATTCAGGAAGCACTGCATCAGGAAAACACTGCAGGTCCAGTTTCCTCAGTGTCTTGGGAAGCTCTGGCTTCTCCACAACTT
TCTCCTTCGGTGTGTAAATTTTGCTCGCCGTTCTTTTTAAAAACCCATCCTGTTTCTTTGTATAATCCCCAGCAGCAGAA |
Primers for UN58593 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCTCCAAAACTCCTTTATTCA |
60.587 |
22 |
CTTTGCCCAACTGATGGAAT |
59.933 |
20 |
168 |
1 |
168 |
| 2 |
CGCTCCAAAACTCCTTTATTCA |
60.587 |
22 |
CGCAAGCAACTTTGAACTGA |
60.172 |
20 |
138 |
1 |
138 |
| 3 |
CGCTCCAAAACTCCTTTATTCA |
60.587 |
22 |
CCAACTGATGGAATCGGAAT |
59.75 |
20 |
162 |
1 |
162 |
|
|
