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Simple sequence repeat (SSR)
>UN58809
TTTTTTGCCCACCCAGCTTTTTAACTTTTCAGCCGTGTGAAAAGAAAAACGGAACAAAAAGTTTAACGTCGTCTACTTCCCCCCTCCCTCGCTC
GCTCGCCGGCCGTCTTCTCAGAGAGAGAGAGATCGATAAAACCCTAATTAGCTTGTACGCAAGTGGCACACTCTCTCCTTAACCGGCTCTGAAT
TGGAAGAAGAATGCAATTTTCTTGTGATCCTGATCAAGAGGGAGACGAGCTGCCACAATATGAACACATCTATCAAAATGACTTCTCTTATCGA
AAGCACAAGAAACAGAAGGAAGAGGATATTTCTATCTGCGAATGCAAGTTCGATTTTGGAGATCCTGACAGTGCTTGTGGTGAGAGATGCCTCA
ATGTGATAACCAACACCGAGTGCACACCTGGTTACTGCCCCTGTGGTGTCTATTGCAAGAATCAGAAGTTTCAGAAATGTGAATACGCCAAGAC
GAAGTTGATCAAATCTGAAGGTCGTGGTTATGGACTAGTGGCTGTTGAAGACATCAAGTTCATAATTGAGTACTGTGGAGAAGTAATCTCATGG
AAAGAAGCAAAGCGTAGAGCTCAAACTTATGAAACTCATGGTAAGCAGCGGTGCGTCTGTCGTCATTGTACGATGAGATAGACAGCGATAGAGA
GCAT |
Primers for UN58809 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCCCACCCAGCTTTTTAACT |
60.483 |
20 |
CTTCTTCCAATTCAGAGCCG |
59.948 |
20 |
191 |
7 |
197 |
2 |
GCCCACCCAGCTTTTTAACT |
60.483 |
20 |
TTCAGAGCCGGTTAAGGAGA |
59.948 |
20 |
181 |
7 |
187 |
3 |
GCCCACCCAGCTTTTTAACT |
60.483 |
20 |
GAGAGTGTGCCACTTGCGTA |
60.056 |
20 |
163 |
7 |
169 |
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