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Simple sequence repeat (SSR)
>UN58824
GGGGGTTTTAAAAGATAAATCGGGTGTGGCAATAAAATTCCATAAAGTTGCAATTTTTATTCTCGAGAGGAAGAAGAAGAAGAAGAAGGAAGTA
ATATCTCTCCATTTCTGTTTTCTTTCTCTTCATTCTATCTCCAGCAGCAATCTCTCCCACGCGATTTTCAAGTCGTTAGGAATAAGCACAGGAG
AGAGATGGGGATCGACAAAGCGATCGGAGAAAGCGACGACAAGAGGTTGAAGACCAAGTACAATAACGCCATCTTCGTTATCACAAGAGCTTTT
TCTCTTTACTCTATTGAAGAGGTGGCCTTTAGTTTCAATGGAGGAAAAGATTCCACTGTGTTACTGCACCTTCTGAGAGCCGGATATTTTGTGC
ATAAGAAAGAGCAGAGTGCTTCTTCTAATAATGGAGGTCTATCAACTTTTCCAGTCAGGACCATTTACTTTGAGAGCCCTTCTGCCTTCACTGA
AATCAATTCCTTTACATATGATGCTGCTCAAACTTACGGTATCCAGCTTGACATCATTCGCCAGGATTTCAAATCCGGTTTGGAGGCTTTGTTG
AATGCTAACCCTATCCGAGCTATCTTTCTTGGCGTCCGTATTGGTGATCCTACTGCGGTTGGTCAAGAGCAGTTCTCTCCAAGCTCCCCTGGAT
GGCCTCCCTTTATGAGGGTGAATCCTATTTTGGATTGGTCTTATAGAGATGTTTGGGCATTTCTCCTAACTTG |
Primers for UN58824 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATCGGGTGTGGCAATAAAA |
60.188 |
20 |
TTTGTCGATCCCCATCTCTC |
60.011 |
20 |
190 |
18 |
207 |
2 |
AAATCGGGTGTGGCAATAAA |
60.188 |
20 |
TTTGTCGATCCCCATCTCTC |
60.011 |
20 |
191 |
17 |
207 |
3 |
CGGGTGTGGCAATAAAATTC |
60.188 |
20 |
TTTGTCGATCCCCATCTCTC |
60.011 |
20 |
187 |
21 |
207 |
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