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Simple sequence repeat (SSR)
>UN58833
GGAGAAGAAAAGAGAAAGGCGTCTCTTCGAAAATATTCAAATCTCACATCCACCCCGCTCTCTCTCTAAAAAGTATCCCGTCGCCGGCGATTAA
AGGAAGAGAGAGAGAGAGAGAAGAGAGTGCTTCGAACACACAGAAAGCTTCGATCTTTCCTTCGTAGCATCAGATTTTGAAACGACCCTATCTC
GATTACAAAATGTCCAGCCGCCACGACAAAGAGAAAGGCGTCAATGTTCAAGTTCTTCTCCGATGCAGGCCGTTTAGTGATGATGAGTTGAGGA
GCAACGCTCCTCAGGTTCTCACTTGTAATGATCTGCAAAGAGAAGTTGCTGTCTCTCAAAACATCGCTAGGAAGCACACTGATAGGGTTTTCAC
TTTTGATAAGGTGTTTGGACCATCATCCAAACAAAAGGATCTATATGACCAGGCCGTTGTTCCAATCGTGAATGAAGTGCTTGAAGGTTTTAAT
TGTACAATATTTGCGTATGGACAGACTGGTACTGGGAAAACATATACAATGGAAGGAGAATGTCGTAGGTCTAAGGGCGGGTCTAGTGGAGGTC
TTCCAGCAGGAGCAGGTGTTATACCTAGAGCTGTGAAACAAATCTTTGATACCCTTGAGGGCCAGGAAGCTGAGTACAGTGTTAAGTCACGTTT
TTGGAACTCTACAACGAAGAGATACAGATCTACTTGCTCCTGAGATATCTCCAGAGTTGCTTCTGAGATAACAGAAGAAACCGTTGCCTCTGA |
Primers for UN58833 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACCCCGCTCTCTCTCTAAA |
59.569 |
20 |
CGTTGCTCCTCAACTCATCA |
59.984 |
20 |
238 |
51 |
288 |
2 |
CACCCCGCTCTCTCTCTAAA |
59.569 |
20 |
AGCGTTGCTCCTCAACTCAT |
60.02 |
20 |
240 |
51 |
290 |
3 |
CACCCCGCTCTCTCTCTAAA |
59.569 |
20 |
GCGGCTGGACATTTTGTAAT |
59.967 |
20 |
159 |
51 |
209 |
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