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Simple sequence repeat (SSR)
>UN05294
GGATCTCCTACAACCATCTGTCTCTCGGTGTGTTCTGTGATCCTCTCTCTCTCTCCACAAACCTAAAATCTCGGGACTTTCGATCTCAGGGGAA
GAGGATCGTGAAAGAGAGGACTCGCGATGACGATTGGTGCGACGCTTCTCGAATCGAATAAGGCTAAATGCTATGCTCCGAGCTTCATCACCGT
CAATCTCTGTCTTGCTCTTATCGATGGCGCTCTCGCTTTCATCGCATTCCTTCAGTTAACTCGGTTTCACCGGCGGGATAAACGAGTTGGGTGG
ACACGACAAAAAGTGCTTCATCTTATGATTGGCTCCTCAAACACTGGTTCTCTCATCTATTTCGTGGCTGCCATTATAGCAACGTGCACAAGGT
GGCATCATTGGTCCACCGCTTTAGGTTTTCTGCTTATGGCGTTTCCCAAAATTCTGTTTCTTGCAACTTTTCTCCTGCTCCTCTCTTTCTGGGT
AGATGTTTGCCATCAGGGAAATGGAGAAGAGGAAGATGAGGATGATGAAGAAAGCAACAGCATCCAGCAAGGGTTGCTTGAAAAAACCAAGATC
AAACCAGGCTCTTCGAGTGCAAGTGACCGCAGAAAGTGTTGCTCTTTCCATGAGATTCATCTCGGCACTAGGCAGAAGTTTGTTGTTGCGGCGG
TTGTTCTTGTGTTCATCTTGATGATATCATTTGCTATCCTTATCTGGATTGCTTCCGGTGATAACTCTGCTGATCCTTCACTATTGGCTGAGGT
GTATGTAGATATTTTCGCTTCAATAATCCTAATCACAGGAGGAGGAATATGTTTCTATGGAATGCGTCTGCTCTTTAATCTAAGGAAGGTAAGG
TCCGAACAAGTTTCAGCAGAGATGAGAAAGGTATCAGGTTTAGCAGGCGTCTCAGTTGTATGCTTCACCGTCAGCTCTTTACTCGCTCTTCTCA
CACACATTCCGCTTTTCTATCATTGGAACCCAAGCAAACTACATGGTGTCAGGGCATTGGTTCTTCTGATCATATACTATTTCATAGGTTCGAC
CGTACCATTGGCTTTCGTTTTGTGGGTTTTGAGGGAGTTACCTCCTCAAGAGATTGTGAGTAGACGAGAAGAACAGAGAAGAATCACTTATGTC
AACTACGAAAGTGTTGCAAGGCAGACTCAGCAGCAGCAGTGGACTGCCACAACCGTTTTTAAGAATCAGGTTTCAAAGGCAAGTCCAATATGAC
CCCAAATAAACATATATCATAGTTGATAGCATGGAGTGAAAATCCGCCAAAGTTCCTCTCTTGTTACCAGGAAAAGAAAAAAACCTCGTGGAGT
TGCGTGATAGTTGTAGACCAAACAAAGGTGTGTCGTGGTAGAAGGAAACGAAAGTAGAAACAACTCGTTTTTTTCTATCTCTCTCTCTTTTTTG
GAAGACAACAGTTTGTTTACAAAAAAGATAGAATGGAGGTCCTGTAAATATTTTTTTCTTTGAACGACAGATTCTTTATTTTTTAGTTTTAGTT
GCATGAAATGTGATCTTGTGGATACATATCTTTTACTTATTTC |
Primers for UN05294 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAACCATCTGTCTCTCGGTG |
59.257 |
20 |
CATCGCGAGTCCTCTCTTTC |
60.096 |
20 |
113 |
11 |
123 |
| 2 |
CAACCATCTGTCTCTCGGTG |
59.257 |
20 |
ATCGCGAGTCCTCTCTTTCA |
60.096 |
20 |
112 |
11 |
122 |
| 3 |
CAACCATCTGTCTCTCGGTG |
59.257 |
20 |
TCATCGCGAGTCCTCTCTTT |
60.096 |
20 |
114 |
11 |
124 |
|
|
