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Simple sequence repeat (SSR)
>UN59388
TTTTTTTTTCCAGTCTCTCTCGCTGAGGCTTAGGCAGAGGAGCATGAACGACATGCTTAGTATCCTTGCGCATACGAGCAATCTGCCTGCTTGT
TTTGTGATATCCAGGTTTTCCTTCAAGAGGCGCCAGAAAGTCTTCCTCGGTGAGGACGTTCTTACCCTCCAGAACATCTCGGGTGGGGTTGAAT
TCTCCCTCTGGGTATGCTTCAGTAAAGAGCACAGGTTTGCTCTTACTCTCACCTTGAAAGGCTGCACTTGGCATTCCAGTGAGAGACTGCAACA
TCCGTGTGTGTCTATCATCATCATCATCATCATCATTCTCGCTGTTACCACCATCAACATCATCATCTTCTGACTCTACGTTTTCATCCTCGAA
ATCGTCGGGGAGCTCGTAGTCGTAGTTATCATGGCGGTCGTAACGGTTGTTCTTCCTGGATTCTTCTTCAGGGACACCTTCTTCGTACTCGTAC
AGATCGCCGCCGTGTTCATCATCGGAATCGATCTCGTCTTCTTCTTCTTCTTCGTCCGAGTTTAGAGGACGTTTCTGGTCCGCAATGACCTTGA
GGATTGAGTTGGGCAAGTGAGGCCCTTTCTTCTTCTTCTTTGACTTAGCTACGCTTTTGGCACTCGATGATGATTTCCTCTTCAATCCTCCCAT
GGTTGTCTGTTTTTCTGTCGACGACTCGAGTGAGAGAGAGAGAGAGAGCC |
Primers for UN59388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGTCGTAACGGTTGTTCTT |
60.03 |
20 |
CATGGGAGGATTGAAGAGGA |
60.003 |
20 |
249 |
411 |
659 |
| 2 |
CGGTCGTAACGGTTGTTCTT |
60.03 |
20 |
CACTTGCCCAACTCAATCCT |
60.111 |
20 |
173 |
411 |
583 |
| 3 |
CGGTCGTAACGGTTGTTCTT |
60.03 |
20 |
CCTCACTTGCCCAACTCAAT |
60.111 |
20 |
176 |
411 |
586 |
|
|
