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Simple sequence repeat (SSR)
>UN59396
GAACAAACAAGCATGCATTTCTCCTGAGAAGGTTTAAAGAGTTATTCCAGAGAATACAAATTCACTAGTCGTTATATAACCCAAAGAAAACATT
TTAAAATGAACGAGAATTTGCTAAAGCTCTAGTCTCCAGGATGCATAGGTTCTCTGAACCAGGTAAGGTAGATTTTTTTGGCTTTACTATCAGA
TCTCGCCAGTCCCAAGAGGTTGCCTTGAAGTGTCTCCAGAAGCCCATGCTTGATAGTCTTTCGAGAGCTGAGACAAGAATCGTGGTAGCATGAG
TCTAAGAATCTGGTCAAGAACTTGTGTCCCCGTCGCTTCAATTGCTCCGACTGGGAAGACTCTAAATGCAAAAGGAATCTCGATATTGACCTCA
ATGACTGCATCTGAAGTAATCTGTTGCTCTGATGATCCCTCCTGAGTGCTGCTATCACACGATACCCGGTTCACCATAGAAGCATCAAATTTAT
CATTTTGAGCAACCACAACAGGAGACCCCTCAAGCTTGCAGGATAAGAGCTCGAGGAGGAGACGCGAATCGGTGGAGTAGAAGAGGTGAGAGAA
GGTTTAGGTGGTTCGTCGAATGATGATGATGATGAGCAGTTGATGGTGAAGGAGAGGGACGGATTCCTCGGGTTTCGATTCGTCGTCTTCTTCG
CGGAGAAGGACAAGGAGGTTAGTTTAAGAGTAGCAGCTGAGCTCAACGCCATAGCTGAAAC |
Primers for UN59396 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTCCTGAGTGCTGCTATC |
59.973 |
20 |
GTCCCTCTCCTTCACCATCA |
60.048 |
20 |
212 |
413 |
624 |
| 2 |
TCCCTCCTGAGTGCTGCTAT |
59.973 |
20 |
GTCCCTCTCCTTCACCATCA |
60.048 |
20 |
213 |
412 |
624 |
| 3 |
ATCCCTCCTGAGTGCTGCTA |
59.973 |
20 |
GTCCCTCTCCTTCACCATCA |
60.048 |
20 |
214 |
411 |
624 |
|
|
