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Simple sequence repeat (SSR)
>UN60147
ATAAATGATTTTTTTTTATATAGAGAACTGCTCACAATGATGATGATTCCAGAGAGTTTTTTTCTTTTCTTGATACTACATGACGACACTAACA
TATAACAACACTACGGTCTTAAAAGACAATAACTTGCGCTCAAAACAATAAAAGCTAAAGAGATGGGGGTTTTAGTTTAAGCCTAAGCCGGATC
CGGATCCAGAACCAGTGGAAGATCTAACCATTGGGTGAGAAAATGAAGCTTGGTTGATGGATGCTGCACCTGCAGGGCTATTATTAAATTGGTT
GTTGCTGCCAAAATGACGTTTGGTGAAGGCGTTGATCCTGCGTTGGTCTGAATAGCATTGAGAGGCAATCTCGGGCCAAATGAGAACGCTTGCT
GTTGTTGTTGTTGTTGGCGGGCCATGAACTGCATCTGCGCATGAAGTTGCGGGTTGTTGCTGAATCCTGGGATGATGCTTGGTTGAGAAGAGGA
AGCTGAAACTTGCTGTTGGTGCTGGAGGAGAGTATTGATGTTGTTGTTACCACCACCTGCGGGTAGAGACATCCCTTGGAGATTATTAGTGTTA
CTAGTCTGTGGAGTGATTCCCCCTGCAGGTGTTGATCCAAATCTTGCTGAGAGCATACGTGCTCGTTCTGCAGCAAATCTCTGACGGGTTTTCT
CTACTTGGTCGCACTCTTTTATCAATAACGTTTCGATTTCTGCAAACTGCTTTAGCTTCAGCTCC |
Primers for UN60147 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGCGTTGGTCTGAATAGCA |
60.011 |
20 |
AGCATCATCCCAGGATTCAG |
60.034 |
20 |
136 |
320 |
455 |
2 |
AAATGACGTTTGGTGAAGGC |
59.978 |
20 |
AGCATCATCCCAGGATTCAG |
60.034 |
20 |
163 |
293 |
455 |
3 |
TAAATTGGTTGTTGCTGCCA |
60.111 |
20 |
AGCATCATCCCAGGATTCAG |
60.034 |
20 |
183 |
273 |
455 |
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