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Simple sequence repeat (SSR)
>UN05388
GGATTACTAACCATTTTGCTAATCAATCACTCTTCACTTCTCCCCAGTCCTACTTTTTTCCATTATAAGCAATTTCTCCATCTCTCTCATACTA
TCTGCACAACACTACTAAAAAGAGCTAAATTGGGATATTGTAAAAGAAGATGTTTGGACAAAGCTTCCCAGAGGATCTTGATTGTGGCAACTTC
TTTGACAACATGGACGATATTCTTGATTTTCCCGGTGGCGATATTGATGTCGGTTTCGGCATCGGTGACTCCGACTCTTTCCCTAACATCTGGA
CCTCTCATAACGACACATGGCCTGCAGCTTCCAATCCTCTCTTCTCTTCCAACACAAACTCTGACACATCGCCTGAGCTCTATGTTCCGTTCGA
AGATATTGTTAAAGTGGAAAGGCCACAAAGCGTTGTAGAGGAATCCTTAGTTGAGAAGAAGGAAGATTCGTTTCCCACAAACACGGATTCATCG
TCTTCTCACAGTCATTTCAGGAGCTCTAGTCCAGTGTCGGTCCTCGAAAGTAGTTCCTCATCGTCTCATACGACCAACACAACCTCACTTGTCC
TCCCTGGAAAGCCCGGGCGTCCACGCACAAAACGTCCTCGTCCACAGGTCCAGGAGAAAGATAGAGTCAACGAAAATGCTTTTGGGGCGGACTC
GCGCCTCATCATTAGAATACCAACGCAGTTTCTCTCCGACCACAGCAAGATGATAACCAAGAAGAAGAAGAAGAAAGCCAAGGTCGTTGTTTCT
TCATCTTCTTGGTCAGGGATTGATCTTGAAACCAATGGAAACAAAAATGTAGATTCGTGTTCTTCAGAGCAGAATCCTGTTAGGAAATGCATGC
ATTGTGAAGTCACCAAGACCCCACAGTGGAGACTCGGGCCTATGGGCCCAAAGACGCTTTGCAATGCTTGCGGTGTACGTTACAAATCTGGAAG
GCTTTTCCCGGAGTACCGGCCAGCTTCTAGCCCGACGTTTACTCCAGCTCTTCACTCAAACTCCCACAAGAAGGTGGCTGAAATGAGAAACAAG
AGATGCAGCAATGTAAGCTACACAAATGAAGAGAATGATCTGCAAGATCTGGTTCTGAGCAATGCCTACATTGGCATAGGAGTAGGAAAGAGTC
AGAGAGTAGGAAAGTTTTAGCTTTAGAAGAGATGGATGAAGAGGAGCAATCAATTGAGGAAGGGATCAAAAGTTTGATGAGAGTTGATTGTGTT
GTATTTTGTATTATATGTAGTGTGAATGGGCAAAACTCTTGAAACAAAGGAAGAGTAAGTTGGGGAAGAGCAGAAGATGTTGAAGAAACTAGTG
AGAGTTAGGTGTTGAATTTTACATTAAATCTTCCTCTCCTTTTCCTTCCTTTCAATTCTTTGTATTTTTATTGTGAGGATTCTTTTTGTAGTTG
ATTTGTTTAGCTAAACTATTATCCTTTTTTTCGT |
Primers for UN05388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTCCACAGGTCCAGGAGAAA |
60.088 |
20 |
CTGTGGGGTCTTGGTGACTT |
60.002 |
20 |
269 |
604 |
872 |
| 2 |
CCACAGGTCCAGGAGAAAGA |
60.229 |
20 |
CTGTGGGGTCTTGGTGACTT |
60.002 |
20 |
267 |
606 |
872 |
| 3 |
TCCACAGGTCCAGGAGAAAG |
60.229 |
20 |
CTGTGGGGTCTTGGTGACTT |
60.002 |
20 |
268 |
605 |
872 |
|
|
