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Simple sequence repeat (SSR)
>UN60377
GGATCTATCTATCTATAAGCGGTTGAAGATTCTCAAAAAAACCATCTCAATTCCGTGCAGATGCAAGTTTTCGTTACACAAGAACGAGATCGGA
AGAGTGATTATTGATCTTTTAACTTAGAGAGGAGAGGAAGAATGTGTGTCTCAATCTCGCAAGTATCGAGATTCAGAATCAACCTATTAGGAGG
AACTTCTTTCCATGGCTGGTTCAAGAACAACTCAACACCCCCTAAGCTTCTCGACATCAGAGCCTCCTCCTCCTCCTCCTCCTCGGTTAATAAT
AATAGTAAGAGCAGATGGGTCAGGAGAAACGTGAGTACAACCACACAAGGAAGCAGGAGCAACACCAAGAGCAGTATCCTTGGAGGAGCAGTTC
CTCCCGTTACTACCAGGATAGTAGATGCAGAAAGCACCACCACAAAGATACAACAACAGCCTTTTGGGAACCTTCAGCAACGTCTTGCCGAAAA
CAAAGATCTGTCTAGTCTCCTCACTGTTATCGTCTCTGATCTCGAGACGACCGGCTTGCATAGGGTGAAGGAGAGGATTATCGAGATCGCTGCT
CAGGATCTAGCTGGTGGTGAGAACAGTACGTTCCAGACTCTGGTCAACCCTGGTGTTCCTATATTGAATACTAGCATCCATGGGA |
Primers for UN60377 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAACCATCTCAATTCCGTGC |
59.939 |
20 |
TCTCCTGACCCATCTGCTCT |
59.945 |
20 |
271 |
39 |
309 |
| 2 |
AAACCATCTCAATTCCGTGC |
59.939 |
20 |
TTTCTCCTGACCCATCTGCT |
59.803 |
20 |
273 |
39 |
311 |
| 3 |
CTTCTTTCCATGGCTGGTTC |
59.67 |
20 |
TCTCCTGACCCATCTGCTCT |
59.945 |
20 |
119 |
191 |
309 |
|
|
