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Simple sequence repeat (SSR)
>UN60409
AGAACTTCCCTCTATCACACGCAAACTCAGCTTCAACTCCTCTCTCTTTCTCTCTCTCTCCTCGCCGTGAAGTCTGCGAAGGAGAATCTATCTT
TATCTCCACAATATTCCGATCTGTAATAAGTGAAATCTGAGTCTGAACTCGTGTGTTTCTTCTCATCTGATTTAATCTTTAATTACGAACGATG
TTTTGCGATTGCTGCTTCTACTGGAACCAAGAAAACTCCGAGTTGGAATGGGAATCGTCCGAGTCAAAGCCTTTCTCGCTTCCGTCTCCTCTTC
CTCGATGGCCACAAGGCACAGGTTTTGCTACGGGGAGGATAAACCTCGGAGAGATCCAAGTGGTGAAAGTCACCGAGTTCGATAGAGTTTGGAA
ATGTAGCAAGTCGCGTGGCAGTAAATCGAGATGCGCCTCTTTTTACAAACCTGTGGGGATACCAGACGGTTTCCATTGCCTTGGCCATTACTGT
CAGCCGAACAACCAGCCGTTGAGAGGCTTTGTCCTTGCAGCTCGGGCTAACGATCCTGATAAGAATGACCATCGTCCCGTGCTGAAGAAACCAG
TGAACTATACTCTAGTTTGGAGTTCAGATTCATCAGACTGCTACTTCTGGTTGCCTAACCCTCCCGCTGGTTACCGAGCCGTGGGAGTCATCGT
CACAGACGAAGCGGAGGAGCCTGGCACCGAAGAAGTGAGATGTGCGAGAGAGGATCTCACGGAGACTTGTGAAACACGCGA |
Primers for UN60409 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCACACGCAAACTCAGCTTC |
60.183 |
20 |
TCGCAAAACATCGTTCGTAA |
60.251 |
20 |
182 |
15 |
196 |
| 2 |
TCACACGCAAACTCAGCTTC |
60.183 |
20 |
TAGAAGCAGCAATCGCAAAA |
59.725 |
20 |
194 |
15 |
208 |
| 3 |
TCACACGCAAACTCAGCTTC |
60.183 |
20 |
CGGAGTTTTCTTGGTTCCAG |
59.705 |
20 |
214 |
15 |
228 |
|
|
