 |
Simple sequence repeat (SSR)
>UN00546
GAACAGATATGAATTAAATTAAGTTCTTAGCATTCCTCATATCATATAGTTTTCATGTCCCACATGACCAAATCAAATATTCAATTGTCTGAAA
CTATGAATGTACAAATTACGAAAGAAAACGATAAATAAAAAAAATAAAATAAAAAGAATTGAGATTTCATTTCATTTCCTCATCTGGGAGCGTA
GGAGACGGTTATATCCGTTGGCCGTTTCATGTTCGTCGCCCACTTCTCCGATTCTAAATACAGCTGCGATATCTTCCCGGCGACTCTTCCCATC
TCCGGCCGATTCACCGGATCCTCCACCACGCATTCCAACGCCAGCCGCGTCAGCTTCTCCACCACCGTCACCGGAAACGAATCCCCTAATCTCC
GATCAATCCACCTCCTCAACCGCCCCTCCGTATCTCCTCCGTCGATCACCACCGCTTTCGCGGTTTCGATCACCGAAGTCCGCTCAAAATCTCC
GGTGGCTTTATCGTACCGATACTTCAGCGGCTCCTCCCCGGAGAGAAGCTCGAGCATCACGACTCCGAACGCGAACACGTCGGATTCCCGAGTG
GCGACCCCGGTGGCTTGAAACTCTGGCGACATGTAGCCTCTCACTCCTTCGAATCTCTTCGATCGGTCTCTCTCCGGCGTCGTCGTCGTCGTTT
CGTTCGTTTCCCCGCATAGCTGCGCGGTCCCGAAGTGGCAGATCTTCGCGTTGTGATCCGGCTCCGTCACGATCACGGCCGAGCTCTTGATGTG
GTTATGAACGAGATTCTCGATCTTTAATCCCGTCTTGTTGTGGATGTAGTCAAGCCCGTGGGCCAGATCCGTCGCGATTTGGATCCTCGAGGCC
CAACTCGACAGCACTGTGAAATTAGGGTTCCTAGGGTTCCTCAAGCAATCAGCGAGGGAGGCTCCGTTGACGTACTCGTAGACTAGGTAGATGT
GATCGCTTCCTCCGGAGACGGAAGCGCCGAGCAGGTTGACGATGCTCCCGTGGTGGCTCCGGCAGATATCGGAGAGGCGATCTCTGAGCTCGTC
TTTGGCGATTCTCCGCCTGAACTTTCTCTGGAAGACGACCACCTCTTTCCCGCGCAAATTGCATCGCCACGAGGCTTTGGAGGAGGAGGAGGAT
AAGCGGTGGGCGAGGAAGTTGTTGGTGGCGGCGCGAATCTCGGAGACGTCGTAGATGTGGGGGTTCTCCGGTAAGGTTTCGCGGAGACTAGCGA
GGGATGCTCGACTTGCGGCTGAGGAGGAGGAGGAGGAAGCAGCTGTTTTGTTAGAGTTAGAGTTTGAGGTCGAGCTAGTTCCTGTTGTGCTTGT
TGTTGACGGAGATCTTCTTGACGAGTGGTGGTGACTTCCCTGAGATTGGCTTGGGCGTGATCGTGATCGTGATCGGGTTGGCTCCGAAGCATTG
ACGCCCATTTTGGATTTGCACATAGAGACGATGTCTTGTTTAAACGTGTGAAGGAGACGTACAAAATCATACATTAGATTTAGACGGCGAAGCG
ATCGCCAAGACAGAGATAGGCGCAATATAGTAGGTATGGACACGGAGACATGCGCAGTATAGTAAGTGTGGAAACGGCGACAGGAAGAAGGAAA
GTCTTCTCGCTTTCTGTCTTTTTCCCCCTTTTTTTTTGCATCTATGTGGTTAGCAATTTATAGAGAGGTTTTTGTAGCTTTTGTTTTTGTGCAC
AGGTTTTTGCTAAGCTTAATTCGTATAAAAATTCTAT |
Primers for UN00546 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCGAATCTCTTCGATCGGT |
59.773 |
20 |
ACGGGCTTGACTACATCCAC |
59.997 |
20 |
200 |
612 |
811 |
| 2 |
GCTTGAAACTCTGGCGACAT |
60.406 |
20 |
ACGGGCTTGACTACATCCAC |
59.997 |
20 |
235 |
577 |
811 |
| 3 |
TCTTCGATCGGTCTCTCTCC |
59.486 |
20 |
ACGGGCTTGACTACATCCAC |
59.997 |
20 |
192 |
620 |
811 |
|
|
