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Simple sequence repeat (SSR)
>UN61014
ATAAGTTTCTGTACATAAAATCGACAACACAACAAATCAAGAATTCATTGGGAAGGTAAAGACCCGGATTATGTATCCGGGTTTGACCCTAGAA
GAGGGAGGACAAACAAAAGAATGTTTCTTACACATACACACACACACACAAGTCATGAATTTAGAAGAAAAACACATACTTATTAACCCTTTGA
TGAAATGGGTTTTAAGTATGATGATGAAAAAGAAACACTCCTGGCGTCCTGAGTATCTGAGAGAGAAACTCAGGTCTAGACTTAGAAATGTTAC
CTTTTAACATTCTTGGATTCTAGATTATCAACACTGAGGTGAAAAAAAAATGCAGATCATGGCACGCCCGCTTCACAAAAACTTTTCAGGCCGA
TATGGCTGCAAAACCTAATGAAGAAAATCTAAGCAAAAAGAGAGGGAAGTAATGCAAGTTATGTCGGCTCCATGGAGACACAACTGCGGGTGTT
TTTTTTTGGTTTGGTTTGGTTTACAAGCTATCAAGAAGGACTCTTTTGCAAGGAGGTGGTTGTGAAAGATTAGCACTTGGACATGGGGACTCAA
CACCAAGTGTTTTCAGCACAAAGTTCCTCTCACTTTCAGAGAATTGTGGGCTTGGGATGCCTGCTGCTAGAGATCTGAACAATGGAGTGACTTG
AACAGGCGATTTGAACTCTTCCTCAACCGAC |
Primers for UN61014 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTGGGAAGGTAAAGACCCG |
60.18 |
20 |
AGATACTCAGGACGCCAGGA |
59.827 |
20 |
200 |
47 |
246 |
2 |
TGTATCCGGGTTTGACCCTA |
60.184 |
20 |
AGATACTCAGGACGCCAGGA |
59.827 |
20 |
175 |
72 |
246 |
3 |
ATGTATCCGGGTTTGACCCT |
60.443 |
20 |
AGATACTCAGGACGCCAGGA |
59.827 |
20 |
176 |
71 |
246 |
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