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Simple sequence repeat (SSR)
>UN61444
AGGATGAAGAGAAGAGAGATTAACGATGAAAACAGAGACATTTGTTGCCGGTTGATAAGGTACGTGGTGGTTAAACTCATGTCGGGTCAAAAGG
AAGATAAGTCTGCCAAGAAGAAACTGATCAAGAAGGGATCAAATTCTGATATCACAATTCACTTCAAGGAAAGAGAAGATAACGCTGCTAATGC
CATCAACACTAGCTCTAGATCAGAGAGAGAGAGGGTGATCATGCTGTTCAATGGTACTGACGTGAAGAGCGTACCGAGTGAAGCTAGCTTTGTC
GCTAAGCCTGAAGATGTGAGGAAAAGATCACAACCGAAGCCAGTTTCGATTGATATTGATAAGAAATCAGATGCTTTTATCCAAAGTAGACTCG
AGATGATGAGAAAAAGGCTATAGCCTTTCCTTAGAACCAGAGATACAGTACTGGTGCTATTCATATTACTAATATGTTGTTGTTATCCATAAAA
TTCATTTTTAAAGTTTTACGAAACAAATACTGTCTTTGTTCTTGATAAATAACGTCTACCTACTCATTCATATACTTGTACTATGTAATATTCC
CATTTTATGAAAATTATTACTTTGT |
Primers for UN61444 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTCATGTCGGGTCAAAAGG |
59.966 |
20 |
CGCTCTTCACGTCAGTACCA |
60.049 |
20 |
185 |
75 |
259 |
2 |
ACTCATGTCGGGTCAAAAGG |
59.966 |
20 |
GCTAGCTTCACTCGGTACGC |
60.183 |
20 |
202 |
75 |
276 |
3 |
ACTCATGTCGGGTCAAAAGG |
59.966 |
20 |
CTGGCTTCGGTTGTGATCTT |
60.255 |
20 |
251 |
75 |
325 |
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