 |
Simple sequence repeat (SSR)
>UN00546
GAACAGATATGAATTAAATTAAGTTCTTAGCATTCCTCATATCATATAGTTTTCATGTCCCACATGACCAAATCAAATATTCAATTGTCTGAAA
CTATGAATGTACAAATTACGAAAGAAAACGATAAATAAAAAAAATAAAATAAAAAGAATTGAGATTTCATTTCATTTCCTCATCTGGGAGCGTA
GGAGACGGTTATATCCGTTGGCCGTTTCATGTTCGTCGCCCACTTCTCCGATTCTAAATACAGCTGCGATATCTTCCCGGCGACTCTTCCCATC
TCCGGCCGATTCACCGGATCCTCCACCACGCATTCCAACGCCAGCCGCGTCAGCTTCTCCACCACCGTCACCGGAAACGAATCCCCTAATCTCC
GATCAATCCACCTCCTCAACCGCCCCTCCGTATCTCCTCCGTCGATCACCACCGCTTTCGCGGTTTCGATCACCGAAGTCCGCTCAAAATCTCC
GGTGGCTTTATCGTACCGATACTTCAGCGGCTCCTCCCCGGAGAGAAGCTCGAGCATCACGACTCCGAACGCGAACACGTCGGATTCCCGAGTG
GCGACCCCGGTGGCTTGAAACTCTGGCGACATGTAGCCTCTCACTCCTTCGAATCTCTTCGATCGGTCTCTCTCCGGCGTCGTCGTCGTCGTTT
CGTTCGTTTCCCCGCATAGCTGCGCGGTCCCGAAGTGGCAGATCTTCGCGTTGTGATCCGGCTCCGTCACGATCACGGCCGAGCTCTTGATGTG
GTTATGAACGAGATTCTCGATCTTTAATCCCGTCTTGTTGTGGATGTAGTCAAGCCCGTGGGCCAGATCCGTCGCGATTTGGATCCTCGAGGCC
CAACTCGACAGCACTGTGAAATTAGGGTTCCTAGGGTTCCTCAAGCAATCAGCGAGGGAGGCTCCGTTGACGTACTCGTAGACTAGGTAGATGT
GATCGCTTCCTCCGGAGACGGAAGCGCCGAGCAGGTTGACGATGCTCCCGTGGTGGCTCCGGCAGATATCGGAGAGGCGATCTCTGAGCTCGTC
TTTGGCGATTCTCCGCCTGAACTTTCTCTGGAAGACGACCACCTCTTTCCCGCGCAAATTGCATCGCCACGAGGCTTTGGAGGAGGAGGAGGAT
AAGCGGTGGGCGAGGAAGTTGTTGGTGGCGGCGCGAATCTCGGAGACGTCGTAGATGTGGGGGTTCTCCGGTAAGGTTTCGCGGAGACTAGCGA
GGGATGCTCGACTTGCGGCTGAGGAGGAGGAGGAGGAAGCAGCTGTTTTGTTAGAGTTAGAGTTTGAGGTCGAGCTAGTTCCTGTTGTGCTTGT
TGTTGACGGAGATCTTCTTGACGAGTGGTGGTGACTTCCCTGAGATTGGCTTGGGCGTGATCGTGATCGTGATCGGGTTGGCTCCGAAGCATTG
ACGCCCATTTTGGATTTGCACATAGAGACGATGTCTTGTTTAAACGTGTGAAGGAGACGTACAAAATCATACATTAGATTTAGACGGCGAAGCG
ATCGCCAAGACAGAGATAGGCGCAATATAGTAGGTATGGACACGGAGACATGCGCAGTATAGTAAGTGTGGAAACGGCGACAGGAAGAAGGAAA
GTCTTCTCGCTTTCTGTCTTTTTCCCCCTTTTTTTTTGCATCTATGTGGTTAGCAATTTATAGAGAGGTTTTTGTAGCTTTTGTTTTTGTGCAC
AGGTTTTTGCTAAGCTTAATTCGTATAAAAATTCTAT |
Primers for UN00546 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCCGCCTGAACTTTCTCTG |
60.126 |
20 |
GAGAACCCCCACATCTACGA |
59.927 |
20 |
152 |
1045 |
1196 |
| 2 |
TCTCTGGAAGACGACCACCT |
59.835 |
20 |
GAGAACCCCCACATCTACGA |
59.927 |
20 |
138 |
1059 |
1196 |
| 3 |
TCTGGAAGACGACCACCTCT |
59.835 |
20 |
GAGAACCCCCACATCTACGA |
59.927 |
20 |
136 |
1061 |
1196 |
|
|
