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Simple sequence repeat (SSR)
>UN61854
GATCATACAAATACACATACATTAAAGCGACTACATATAAAGTATATATTAGGATTGTACATTATTTTGGGCATGTTGTGTTCTTAGCAATAAA
CATGTTGAGCTGCAGTGGATTATTAAAAATAAAAAAATCAGTCTCAGGTACCAAAAGCTTCGGACCAAAATATCTCCTGGTCTAGAGATTAAGA
TCATCGGATCAACACTTCACTTACGAGCGAGCTAGTCCCGACGACCAAAATCTGAGGTCTGCCAGCCTCCAAACGTAGATGCGAGTTTGTTCTT
AACTTAAACTGACATTTCTTGCTTCAATTCTAAAGCTTGAGGTGTTGGTGTTGGTGATCTATCTTTAACAAATGTCCTTAGACATCCGTTAATT
ATGCGTGGTGCTGATCCGTCGCAAAACCGTTTTGCAAGATCAACAGCCTTTTCCACATCATTATTCTAACAGTGTTTAGTTCACAAGGTCATCG
CATTTCAAAGCTTAACTGAAGCTAGAGAGAGAGAGAGAGAGAGAGATACCTCGTTAATGACAATGGGGTGTCGGGTTTCAATGACTGCAATTTC
AGACATTGCTAAGTGAAGAATGGAAAACTCTAGTATTCTTCCAGCTGGTGCACTCTGAGAATAGGTGCAGCAACATTCATAAAAGTATTTATCC
GTAGTACGAGATGAAAATATATATATGTATACAGTCACACAACGAAAATAAGAAGCTGCTTCTAGCGC |
Primers for UN61854 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAACAGCCTTTTCCACATCA |
59.691 |
20 |
AGTCATTGAAACCCGACACC |
59.827 |
20 |
140 |
417 |
556 |
| 2 |
CGTTTTGCAAGATCAACAGC |
59.469 |
20 |
AGTCATTGAAACCCGACACC |
59.827 |
20 |
153 |
404 |
556 |
| 3 |
CCGTTTTGCAAGATCAACAG |
59.317 |
20 |
AGTCATTGAAACCCGACACC |
59.827 |
20 |
154 |
403 |
556 |
|
|
