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Simple sequence repeat (SSR)
>UN61916
GGACAAACGAAGGCAATATAGTAGTACTTGGTCGTTGTCCTGATCAAAAAAGAAAGCAAAAAGTAGAAGACAAATCGTTTATATACCATTGATA
GATCGATGGAGGAGCAGCAAGGCCACGAAAAGGATAAAATTGCTTCATCGTTTTCCTCAGAAAGAGGAAGAAGAGAGGTGACTGAGATAATAAT
CAACGATGATGCGTTGGAAGAGATAATGCTGAGGCTTCCGGTAAAATCCCTTATAAGTTTCCAAGCCGTGTCTAAACACTGGAGACGTATGATA
ACGCATAAGTCGTTCAGGGAGAGATACATGTTGCATCAGAAAACCCTAGAACCCAAATTGATCTGTGTCTACAATGATATAGACTGTTATAAGG
CAAACTATGCTCTAAAAGAGATGAGGTTGGAGTGGTCTTCGGCATGTTAGTTGCAGTGGAAGAAGAAGAAGAAGTTTATCATATTAGTAATGAT
CATGAACAAGAAGATGTGATGGTTTCCAAGAGTCTAGATGGTCTTTTCTGCTTCTATGGACGTACAAACTTTAAAACCCCAATTAAAGTGATGA
ACCCATCCACTAGATGGTCCTTCACGCTCCCTCTGGCCAGTATTCAGCTAGTGCATTTAGACAGCAATGTAGAGTTTTCTCTACCGGATTTGGA
AAGACTATGTG |
Primers for UN61916 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTCGGCATGTTAGTTGCAG |
59.488 |
20 |
TGAATACTGGCCAGAGGGAG |
60.21 |
20 |
198 |
413 |
610 |
2 |
CTTCGGCATGTTAGTTGCAG |
59.488 |
20 |
CTGAATACTGGCCAGAGGGA |
60.21 |
20 |
199 |
413 |
611 |
3 |
CTTCGGCATGTTAGTTGCAG |
59.488 |
20 |
GGAGCGTGAAGGACCATCTA |
60.218 |
20 |
182 |
413 |
594 |
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