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Simple sequence repeat (SSR)
>UN62078
TTTTTCCACCGTAATCTTCAAAGCATCCTCCGATCAAAAAAAGCAAAACTCTTTTCAGGAGATCTTGAATTCCTCATTACAGAGAGAGATATAT
AGAGAGAGAGGAGTAATGGAGGTATGAGAGGGGTGGGAGATGGCGAGGGGAGGAGGAGAATACAACAACAACAACAACAACGGAGGAGGAGGAG
GAGGAGTTGTTCTTCTCTCCTACAAAAGAATCACTCTACTCGTTTGCCTTTTCAACATCCTCATCGCTCTCTTTGTTCTTCGCTTTCTCTACGC
TTCTTCTCTCCACATCTTTCCCAATCACGACAATGGTGTTAAGTACACAGCAGATGAGATTAGGAGAATGGAGGAATCGGTTCGGATTCGAAGA
TCTAAAGAACCTGTTGAGCTTGTTAGATTGGTGAAGAAGATGAAACATGAGGTGGCCATTGCAGAGTCAAGTGTTGAGCTGTCTCCTAGTGTAA
AAGGCAAACTAATCGATGAGATCTTGGAGCGTTTGAGAAGGTTGGAGGAGAAGTCTAACGTTACCCTTCTCAGAGGTTTGGTGCTCTTCATATC
CTAACATTATAAATTGATCTTTGATTTTTTTGGTGCTAGGCTATGTCTTTTAGCATAAAGTCCTTACATTTGTGATGGTGTCTTGTTAACTAGA
TTTTGTCTTATTACCTAACTATGCAGATGTGGTCGTTGTTATCAGTGTAGGA |
Primers for UN62078 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATGAGAGGGGTGGGAGATG |
59.879 |
20 |
AGCGAAGAACAAAGAGAGCG |
59.898 |
20 |
156 |
117 |
272 |
2 |
TCTTCAAAGCATCCTCCGAT |
59.773 |
20 |
AGCGAAGAACAAAGAGAGCG |
59.898 |
20 |
258 |
15 |
272 |
3 |
AGGTATGAGAGGGGTGGGAG |
60.328 |
20 |
AGCGAAGAACAAAGAGAGCG |
59.898 |
20 |
159 |
114 |
272 |
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