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Simple sequence repeat (SSR)
>UN62401
GGGTAATGAGGAAAGTTCAGGTCTGTTTCCACAATGTCTACGTGAAGCAATGCACGCAGCCTCCTCCTGAAGATTTCTGTAAACCCCATCATAC
ATCTCTCTCTATCTCTTCTCTTATCTTTTTCCATACAAGTCTTTCTGACTATCCTCAAACTTGTTTTTTTTCTTTATTTTGCTCTTTACCATAG
AAAGCTAAACCCGGAAAAATTATTTACATTATCCCATTTTATTATATAATATAAAAGAGAAAATATTAACCAGTGGTGGTGGTGATAATTACTG
ATAAGAGTAGGTGTTTTGCTCCTTCTATCGCCAGGTGTTGTTGCCTTCTTCTTCTCTCTATCCTTTTTTTTAAATTTTTTTTTTGCTTTGAGTG
GAGAGTACTTAATGAGACCAAACACAGTAGATTTCCAGATCTAATCACAGTCGTGGTCATGAGTTTTCTGTGAGAGAGAAATAAAAAGCTATTT
TGTCGTCTTGCTCCTTTCTTTGGGCTGTGGATTCAGACACAACTTGTCGGAAAAGTTCTTTGGGATTTTCAAATTTAGAACAAAGTAAAGGTTG
AAACTTTTCTGAGCGAGAGAGAGAAGAAGAAGAAGAAGAAGAAGAAGGAATGGGTCATTACGCAGCAGAGTGGGATGATAAAGCAGCAGCTACT
GAGATAACCAAAGATGGGACGGCATTGACAAGTCCTTCTTCGTATCCGCACGGCGCTTCTGCAAAGATAGTTTACACGGAGGACAGTGATTTCG
TGGAGAATGACAAGTGAGAG |
Primers for UN62401 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTCTTGCTCCTTTCTTTGG |
59.986 |
20 |
AAGGACTTGTCAATGCCGTC |
60.119 |
20 |
222 |
474 |
695 |
2 |
TTTCTTTGGGCTGTGGATTC |
60.051 |
20 |
AAGGACTTGTCAATGCCGTC |
60.119 |
20 |
211 |
485 |
695 |
3 |
CGTCTTGCTCCTTTCTTTGG |
59.986 |
20 |
TGCGGATACGAAGAAGGACT |
59.836 |
20 |
235 |
474 |
708 |
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