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Simple sequence repeat (SSR)
>UN62519
GGGTTTCCATCCCTACCCGGAGAATCGAGAAATCTCCCTTTTAAGCTTTTCTCTTCGGGTGTCTCGTTTCCAATCGCGCGTTTTTCTTAATCTT
CGGAGCTTCTGCAAATTCAACCCTCCTCCTCTGTGCATTCGTTACCTCTCGGATTTTTTTTTTGTAGTCGCTGCTTCAAATCTGGAGAAAAGTT
TTTATCACCCGTAAGCGCTTCAGGAGTTGTTTGAATGGAGGGTCCGGAAAGATAAGATATATTTAATTCTCTCTTCGTGTGGTCTTTTAAATAG
TTTGCTGTCAATAAAAAAAAAAATAGTGGAAAAAGAAGAAGAAGAAGAAGATGACAATGCTGGCTTCTCTTTTCAGCTCTTTATCCTCTAAAAT
GCTGTCGGTTTCCACCTCTGATCACGCCTCTGTGGTTTCATTGAATCTCTTTGTTGCACTTCTCTGTGCTTGTATTGTCATTGGCCATCTTTTG
GAGGAGCATCGATGGATCAACGAGTCCATCACTGCTTTATTGATTGGGCTTGGCACTGGAGTGGTCATTTTGTTGATTAGTAGAGGGAAGAACT
CACATCTCTTGGTCTTTAGTGAAGATCTTTTCTTTATATATCTTCTTCCACCCATTATATTCAACGCAGGGTTCCAGGTTAAAAAGAATCAGTT
TTTCCGCAATTTTGTACTATTATGGCTTTTGGCGCATTGGGACTATATCTCTTGCACTGTAATATCTTTCGGTGCATGCAGTTCTTAGAATAGA
CATGCG |
Primers for UN62519 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGAGGGTCCGGAAAGATAAG |
59.897 |
20 |
GTGGAAACCGACAGCATTTT |
59.978 |
20 |
167 |
225 |
391 |
2 |
GGAGGGTCCGGAAAGATAAG |
59.897 |
20 |
GTTGATCCATCGATGCTCCT |
60.042 |
20 |
267 |
225 |
491 |
3 |
TGTGCATTCGTTACCTCTCG |
59.864 |
20 |
GTGGAAACCGACAGCATTTT |
59.978 |
20 |
266 |
126 |
391 |
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