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Simple sequence repeat (SSR)
>UN62562
AAAAGATTTATTTCAATAACAGTGGAATAAGCATATGCCCTCTTGGCAAAAGAACGTACTCTTTCAGACCAAATCAGAACATAAGTCATTTAAG
AAAAGAAAGAGAAACAGGTCAAAGAAGAAGAAGAAGGACACACATATTATGATGGCTTGTAGTATTTGGTGGCCACAAACGGCATCTTAGTGAT
GTTGCCTTCATAAGGTTTCCCACGGACCAAGATCTTCACTTTGGTCCCGTTCTTGTGCTGACCTGACTTCACGTACCCCATGGCTACGTTCTTC
TTCAAGTTAGGGCTAAACCCACACTCGTGATCTCTCCAATCTTGTCACCATTCTCATCGTGCACCTCGCTATGCGACCTCGCCGGCGGTCCAGA
AGAGAAAAACCCCACTCTCCTGATAGTAGGTCCGTCTTGAAGCTGTTTGAGAATCACATCAGCGCCAAGAAACCCTCCTTCAGCTCTTCTACGT
TTCCCTATGGCCCATGCGAGTCCAGCTTCAACGGGAGTAATGTGCTGCTCCATGTCGTTTCCGTATAGACAAAGCCCTGCTTCTAGCCTGAGAC
TATCTCTTGCTCCTAGACCCGTAAGCCTCACCTTCCCCTCGGACTTCTCCAAGATCGCTTTGGTTAAATCAACCGCATGCTCGGATGGAACAGA
GATCTCAAACCCATCTTCTCCAGTATACCCGGTCCTGGTAAGGAAGCAGGTG |
Primers for UN62562 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TAAGCATATGCCCTCTTGGC |
60.196 |
20 |
CACAAGAACGGGACCAAAGT |
60.005 |
20 |
218 |
28 |
245 |
2 |
TAAGCATATGCCCTCTTGGC |
60.196 |
20 |
ACAAGAACGGGACCAAAGTG |
60.005 |
20 |
217 |
28 |
244 |
3 |
TAAGCATATGCCCTCTTGGC |
60.196 |
20 |
GAACGGGACCAAAGTGAAGA |
60.088 |
20 |
213 |
28 |
240 |
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