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Simple sequence repeat (SSR)
>UN62611
CCTGCAACACTTTCTCCTCAAAGAAGCAAATGATTAAACATACGTATTTTCCAAAAGTTAAAAGAAGAATAAAACAAGACCTACTGAGTAGTGA
GTTCTGACTATTCCCCTGTCTCCTGTGTCCAAAACTAACACCTAAAAGAAGAACTCGGCTCTCTTTGTACATAGTAACTGCAAAACAACACAAT
ATGGGACTTTCACAAGAACTAAAGCAAACGCAAAACCCAAAAGCCAAAAATGATTTGCCAGTGTGGGGCGCAGTGGAGATATATATATATAGCC
AAAGCGTGTCTCTCTCTTTTCTCAAAGCTTTGGCTGATTAAGGTGCACCTAAAGAATCTGTCTCAACTGGTTGTTCAAAGCCTGATGAGTTGGT
TGCTGAGCACCTTTCTCTTTCTCTTTCTCTCCCCGCTGCTGCTGCTTCAGCTGCATCCTCTGCTGCTTCTGCTTCTGCTTCGGTTTTCTTGGCA
AACCGGCCTCCACTAGCCCTTGCCCTTCTCATCGCATGCTTGTGTCTCGACTCATGAAGATACGGCTTTCTGTTGATGACTTTCCTTTCAAGCT
CAGCCTTGGCACGTGCTCTCCTCCGCCTTAGAATTCCCTCGTACTGTTTTGCATTCACATAAACAGGTTCTTGTGTCATGTCAAGCGG |
Primers for UN62611 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAAACCCAAAAGCCAAAAA |
59.951 |
20 |
TGCTCAGCAACCAACTCATC |
59.992 |
20 |
167 |
219 |
385 |
2 |
CAAAACCCAAAAGCCAAAAA |
59.951 |
20 |
GCTCAGCAACCAACTCATCA |
59.992 |
20 |
166 |
219 |
384 |
3 |
GCCAAAAATGATTTGCCAGT |
59.945 |
20 |
TGCTCAGCAACCAACTCATC |
59.992 |
20 |
155 |
231 |
385 |
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