Simple sequence repeat (SSR)
>UN63009
GATCTCTTGCATTGGGTATCATGGACAACATATATATATATATAAACATAATTAAAAGTTTCAATCACTTGCAACTGCATTTAACACATAGTCT
GGCGAGTGAGTAAACCCAGAAGACAGCCAACCACCCCGTTTTATTGCATCCATGGTTGGTAATACATACAGCTTTCAAGTCAGGGCCATTAGAT
ACAATTTTACTGCAAACCATCAAACTTTCACCAACGAGAATGGCCGTATGCATGTCCCTGACTTTGTTGCCCATGATGGTGACGATCATGATGG
AGATGATATGCCTGGGGCCATCTCTGTCGTTTCTAAGGTTGATGGTGGTCGTAACAAGCGTGCTGAAACATCCACAGCAGTAACATCTCTAACT
GGTCGCCATCAAGAAACCTTTGGCATCAAAGTCTTCAAAGGTGGTCAAGAAGCCACATAAGGAATAGGTGAAGATGAGGGTTGTGATGCGGATG
GCGTACTTGCTATTGCAATAATGATTATGTATCAACGTTGGTTTTTTCTTTTAAACTATGCCCTTTTATGGAGTTTTTTGGTATGTTTTTAAAA
AATCTAAAACTATAATAAAAA |
Primers for UN63009 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTGCATTGGGTATCATGGA |
59.35 |
20 |
GGCAACAAAGTCAGGGACAT |
59.973 |
20 |
254 |
6 |
259 |
| 2 |
TCTTGCATTGGGTATCATGG |
59.35 |
20 |
GGCAACAAAGTCAGGGACAT |
59.973 |
20 |
255 |
5 |
259 |
| 3 |
TGCATTGGGTATCATGGACA |
60.757 |
20 |
GGCAACAAAGTCAGGGACAT |
59.973 |
20 |
252 |
8 |
259 |
|
|
