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Simple sequence repeat (SSR)
>UN63161
GGGTCGATCTCGTATAACTCACTCACCATCGACATCCATCCCGCAGAAAATCTCAGGCTTTTTCGTTTTAGTGAAGTTGCTATAATGGACGAAG
AGCATTCCGCTTCAAATGCAACTAGGGTTTCAGGTAACAAAAGAAAATTTGGTGACCATGAACATGATGTCTCCGTTTCAAAGAAGAGTTGTAC
TGAATGTGTAGCAATCGTTTCATCAACCATCGAGAGTCTTGTGGTTTTTAAAGACGAGCTTGCTTCAATTCGAACATTGCTCTCTGGCAGTTTT
GATAAACTTAAAGACGAGCTTGCTTCATTGTTCGTTGACAGTTTCCAGAGTGTTAAAGACGAGTTTGCTTCTTGTCAAAATGAGCTTGATAAGT
GGAAGTCAGCGTTTAAAAAGGAGTCCTTTGTACCCGCTAGAAAATCTCCTGAACCTCAACATGTGATTGACTACATCCAAACTCTAAGATCTTC
CGACAAGTCTTTGAAAGAAGAGTTGGAAATTGCGCAAATGAAATTAGCTATCCGTGATCTGAAAGCTCAACTCAAGCCAGAGTCAGACAAGCTA
ACAGATGGGGATACAGAAGTCCACGACGAGCAGCAGCAGCAGCAGCAGCAAGGATCGACTCCTTCTGGTCCGTCACGCAACGTGGCATATCTCG
AGGAAGAGTTGAAGCAGCAAATGCGAGATCGCAGAGTTGAATGAGTATCAGAGTGGAGTTGAAGGAGATGGTGAAGCAGTTGGAGTATTATCGC
ACTTGGGCAGTG |
Primers for UN63161 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGGATACAGAAGTCCACGA |
59.927 |
20 |
GCTGCTTCAACTCTTCCTCG |
60.277 |
20 |
106 |
571 |
676 |
| 2 |
GGAAATTGCGCAAATGAAAT |
59.913 |
20 |
GCTGCTTCAACTCTTCCTCG |
60.277 |
20 |
182 |
495 |
676 |
| 3 |
GGAAATTGCGCAAATGAAAT |
59.913 |
20 |
GTGACGGACCAGAAGGAGTC |
59.688 |
20 |
146 |
495 |
640 |
|
|
