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Simple sequence repeat (SSR)
>UN05571
GAGGTTCTAGGGTTTCTCTTTCTCTCTCTCCGCCGCGTTCTCCTCTCTCTCTCTCTCACACACAATCTCAGCTTCTCCTTTCCCTCCTCCCAAA
ACTTCTACGTCTTTGCAGATATTCCCTTAAACAGATGAGTAGTGTATTCAGCGAAGAGATCCTAATCGATAAGCTCGCGAAGCTCAACAGCACT
CAACAGTCCATCGAAACGTTATCGCATTGGTGTATATTCAATCGGGTGAAAGCTGAATTGATCGTGACGACATGGGAGAAGCAGTTTCACAGCA
CGGAGATGGCTCAGAAAGTGCCTCTCTTGTATTTGGCTAATGATATTCTTCAGAACAGTAAGCGTCAGGGCAACGAGTTCGTGGACGAGTTCTG
GAATGTTCTTCCCAAGGCGGTCAAAGACATTGCTGTTTCTCAGGGTGATGATCGTGGCAAAGGCGTTGTCTCCCGTCTGGTCAAGATATGGGAA
GAAAGAAAAGTGTTTGGATCCCGTTCTATGAATCTTAGAGACGCTGATGCTTGGTGAAGATTGCCCTCTCCCACTTGATGTCACCAAGAAGCGA
TCCCGTGGATCCAAATCCTCTAAACGTGATTCAAAGTCGTCCAGAACGAAACTATCAAGTGGAGGTGTGGCTGAGAAGATAGCATCAGCATATC
ATTTGGTTGTTGCTGAAAACTCAAATGAAGAAGCTGAGATGAGTAAATGCAAGTCTGCTGTTAACGAATCAGAGATGGAGAAAGATGTTGAGAG
CTTTCTCTACTACTGTGAAGACACCCGAGAGAAATCACTGGCGAACACTGGAG |
Primers for UN05571 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTCTTTCTCTCTCTCCGCC |
58.842 |
20 |
GCTGTGAAACTGCTTCTCCC |
59.997 |
20 |
267 |
15 |
281 |
2 |
TTCTCTTTCTCTCTCTCCGCC |
60.219 |
21 |
GCTGTGAAACTGCTTCTCCC |
59.997 |
20 |
268 |
14 |
281 |
3 |
TCTCTTTCTCTCTCTCCGCC |
58.842 |
20 |
CAATTCAGCTTTCACCCGAT |
60.074 |
20 |
234 |
15 |
248 |
|
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