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Simple sequence repeat (SSR)
>UN63434
GGAATATTGGATCTTCCAGAGAATCTGGTAGAGGATGAGATCTTCTCTAGGCTGTCGATTTCATCTCTGAACTCAGTGAGATCTACCTGCAAAA
AATGGAACATTTTACTTAAAAATCAGATCCTTTTGGGTGAAGCAGCAGAAAGAAGAAAGAAGCACTTCCTGATGCTGGACTCAAAGTCAAAGAG
GATCTGTTTGATGAACTTGGATTTCCTCCGCAAAGACAAAGACGATGGCGAACCATCTATAAAACAAGTAAGCCTACTTGTTCAAATCCAGATC
TCCACGGTGTTTCAGTGTGATGGTTTGTTGCTATGCGTCCTTGAGGATGATAGCTCTAGGCTCTTGGTATGGAATCCTTACTTAGGACAAACCA
CGTGGATCGAACCCAGACACAGTAGTTTCCATAGTTCAGACAGGTTTGCTCTCGGATACGACAACAACAACAACAACAACAACCACAAGATCCT
GAGGATCTCTTCCAACGAAGAACACGTTTTGGGGTTCGAACTCTACGAGTTTAGCTCGAGTTCTTGTAAGGTTCTTGATGATGTCACAAGCGAA
CACGTTTTATGGTCTCATGCACACGGCGGCGTCTCTTTGAAGGGAAACACTTATTTTCGTGCGAGCCCTGTAGCTTCCTTCCTCTGTTTCGATT
TCACAGCAGAGAGCTTTGGACCGCTTCTCCCTCTCCCGCCGTCTCATTCTTACGATGGATTGCATTTTCTGTCTTTCTCTTGCGTAGAGAGAGC
AGCAGCTCGCCGTACTGTATCAACACTGGAGACACGTCAGACGATCGAGATA |
Primers for UN63434 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTTGCTATGCGTCCTTGAG |
60.011 |
20 |
CCCAAAACGTGTTCTTCGTT |
60.008 |
20 |
196 |
308 |
503 |
2 |
CAAATCCAGATCTCCACGGT |
59.927 |
20 |
CCCAAAACGTGTTCTTCGTT |
60.008 |
20 |
233 |
271 |
503 |
3 |
GACGATGGCGAACCATCTAT |
59.923 |
20 |
CCCAAAACGTGTTCTTCGTT |
60.008 |
20 |
275 |
229 |
503 |
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