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Simple sequence repeat (SSR)
>UN00553
GGGAAACAAAATGGCGGCCATGAACTCGAGTGTTCTCACATGCAGCTACGCAATCTCTGGTGGTAGCTCGGCAGAGCTGAACCAGAGAGTGGGT
TTAGTGAATTCATCAGTTGGGTTTGGTCAAAAGAAACAAACGCTTCCTGTGATCAAAGCTCAACAACGAGATGGTGGTGATGATGTTAATGGAA
GAAGATCAGCCATGGTAATCTTAGCTGCTACACTCTTCTCCTCTGCTTCTGCTAATGCTGGTGTCATCGATGAGTATCTTGAGAAGAGCAAAGC
CAACAAAGTAAAGTCTTGAAAAACGTTCTTAATCTTTGTTGGCATTTCTAAAGAAAACTTGCGTGACAAGTAATTGTTATTTTAATTACAGGAA
CTGAATGATAAGAAGAGATTGGCAACAAGTGGAGCAAACTTTGCGAGAGCATTTACTGTCCAGTTCGGAAGCTGCAAGTTCCCTGAGAATTTCA
CTGGTTGCCAAGATCTTGCCAAGCAGAAGGTTATTTCCCTAAAAACTCTAACCTTTTATTCTTTGTGAGATCGTTAGATGATGAGATTTATCAT
GTTCTTCTTATTCGTTTCTAATGTATTTGCAGAAAGTACCATTCATCTCAGAAGATTTGGCGTTGGAATGCGAAGGCAAAGACAAGTACAAGTG
TGGTTCCAATGTTTTCTGGAAATGGTGATCATGTTTTGTTGTCTTTTTTAAATCCATTCTTTGTATAAACTCAACAGTGTATCTCTCTCTCTCT
TTATTCATCAAAGTTCTCATACTCATTTGAATCTATAAAGTGAATATTGAGGG |
Primers for UN00553 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATGCGAAGGCAAAGACAAGT |
59.882 |
20 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
151 |
632 |
782 |
2 |
AATGCGAAGGCAAAGACAAG |
60.386 |
20 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
152 |
631 |
782 |
3 |
TGCGAAGGCAAAGACAAGTA |
59.609 |
20 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
150 |
633 |
782 |
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