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Simple sequence repeat (SSR)
>UN63904
ATGTTAAACAGACTCTTAGCTTCGTAAGTTCACATAGAATAGAATAGTGTATACAATTTTGAGACCATCACAGCGCTCTGTTTTGTTTAATCCT
TAAGCGCAAGCAAACACGAACACTGTTGCTTTCTCGTTCCTTTATTTCAGACAAAATGCGAGAAGAGCGATTAGGTATATATATATACTTAGGT
AAGCCTGCAATCAGTTTAGAGTGCGGTTTCCGCAGACGGTTCAGGCTTCTCTACTTGCTTCTTCAGAAACTCCATCACAGACAGACGTCGTTGC
TCGAGAGCAGCAGAATCATCAGAGTCCAGTTTCAAAGATTCCAGCAGTTTCATCCCTTCCTTGAAACCATCTGTGGCTGCATCTTCATTTTGTA
GACTCCTGTCTATATCTGCAACTTTGGCTAATGAAACCGCCACATCCAGAATTTGTGAAGGAGCATTTGGGTGATGGTTCATTGCATCACGTCT
AACATTTAAAGCCCGGAGGTAATACGACGTTGCAGCTTGTAGATCGCCATCATAATATTTAACATCTCCTATTTTATTGAGTGAGACAGAAAGT
GTATGTGTAATCTCCAAATCATCCATGGGCAGTTTCATAAGGAACTCAATACTCTCTTCGAAATGTTTGACTGCAGAACTTGAGTCTCCCATTG
CTTGGCTGCAGTCGCCAAGCATACCAAGGACTGCACCAAGCTGTGAACACAACTCTGGTGTATTGCCCTCCCTCCCTAGCTG |
Primers for UN63904 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AATCCTTAAGCGCAAGCAAA |
59.985 |
20 |
AGCAACGACGTCTGTCTGTG |
60.096 |
20 |
195 |
89 |
283 |
| 2 |
AATCCTTAAGCGCAAGCAAA |
59.985 |
20 |
AGCCACAGATGGTTTCAAGG |
60.111 |
20 |
272 |
89 |
360 |
| 3 |
AATCCTTAAGCGCAAGCAAA |
59.985 |
20 |
GAAGGGATGAAACTGCTGGA |
60.195 |
20 |
253 |
89 |
341 |
|
|
