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Simple sequence repeat (SSR)
>UN64009
GAACCTTTTAAGGAAACAAATGAAGTTGCTTATGGCAGTTTTCAAAGCCATGTTCCTGTTAACTCTCTGCAACCTAAAGCCTGGCCACAACAAC
AACATCACCAGCCCTTAAGAATTGATCATAAGTCTTCTGCTACTCAGTTTCTTCAACCGGGCAAACCGCTAGATTCATCGTCTCAGCAAAGAGT
AATGGGTTTTACCTAATAATGCTGGTCCTCCTCCTCCTCCTCCTACTACAAGCAAGGCAGACTTGTGGAGAGGAAAGACGTTTATTGACCTAGA
AGCTGATGATACTAATGATGATACCAACACTATCATCCATGAATCAAGTTTTGCTTCTCTTCATCAACAACAACAACAACAACAACAACCACGC
CACTTGTATCCTACTTATAATCCTACTCTAGAGTCTGCTGTCCCTTGGAACCGTCTGCATTCTCCTTGGCAGAATCCTACTAGCTTTGGTTTCC
CTCAGGGAGTTGCTCCTTCAGCGCAGAGATACCCGGTTCTTAACCTCTCTGACACAAATGCTCAGAAACTAGCGTGTCTCGGAGATAGATTACA
GTTTGAAAGCAATGCTAGATATAACTCAGGGCCTCGGTCGAACCACCAGAACATGTTTTACAGTGAGTGTTCTTCTTCATCCAAACCAAAAGAA
CTGGCTATAGTTATCCTAAC |
Primers for UN64009 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGCAGACTTGTGGAGAGGA |
59.986 |
20 |
AGAATGCAGACGGTTCCAAG |
60.255 |
20 |
197 |
243 |
439 |
2 |
AGGCAGACTTGTGGAGAGGA |
59.986 |
20 |
CAAGGAGAATGCAGACGGTT |
60.255 |
20 |
202 |
243 |
444 |
3 |
AGGCAGACTTGTGGAGAGGA |
59.986 |
20 |
TTCCAAGGGACAGCAGACTC |
60.386 |
20 |
184 |
243 |
426 |
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